Seriola lalandi dorsalis (Yellowtail amberjack): 111653255
Help
Entry
111653255 CDS
T06058
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111653255 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111653255 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111653255 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
slal03029
]
111653255 (rb1cc1)
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111653255 (rb1cc1)
Membrane trafficking [BR:
slal04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111653255 (rb1cc1)
Mitochondrial biogenesis [BR:
slal03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111653255 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Lant_leader_dom
Motif
Other DBs
NCBI-GeneID:
111653255
NCBI-ProteinID:
XP_023259508
Ensembl:
ENSSLDG00000013089
UniProt:
A0A3B4XJW7
LinkDB
All DBs
Position
Unknown
AA seq
1623 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDTSYANYQH
DLEEIKVKLTKLGTAVSVMARIPLLESLTRHSYRESVEKSTSTPEKDSDETEEEKSTDSM
PCTTDAKKPSNLSASISASGTATCEPTADQETNEMTDSGGLRAALLDDDTPDFANPSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLEDLQYLKSCCPVEVQPFLMVPTMCD
FEPLNHHVETLHQLVQAAQSVDEMSRTITDLLSEQRASCSQSAQRSTVLTPQSESILGAT
TPMSSKTPSSLSLQGPSCRPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEENMNSPNPISDPTSPDMMVESLYSSVINAIDNKRMQ
DTTTLERENLRITVLKQVIDKYQSAAEESHSNLRSVKDDLYHLRGLVLKEQHDFGFVLRS
MCTEVRNIVDNFSQTHELELKEQHESELLSVRQELEKQVQTLTEENQVNQNIVRDVQRAM
LELEGLMERKEKELTHLENERERWVETESSQTDRIKNLEQMMSDQAEEIKTLAASKDSLT
SQLENLHFEIERGQQKIRQELEVAEQSHLKELEDRLKQEHKAELESLTKDNQDALANLAA
ENSAKLSEAADHHTTALREKDNQIKDLAARITELAELRCKVEVELALKESETEEVRLLFE
EAKIQQAEAVKSQVEAETKVLSEELAGIKKQLQVKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHEEETILLRSELSSLQQQAQDDERNHAEQQQKLKQELDQQVELSEEKEKQLRSFQE
LEQELRTVINKLQAENDLLSKKLEQDRQAVEKDLEKEEATKVASPDAFKELEQEKEDMEK
RLLEKIKQLENELHERRSLKSDEGLSLHAEGRADAGAPLSLDSALQERLQQERASLQSQM
ELLEKKKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRNVTQQQEKDKA
LIETLSEDRASVMQEKKHLEEELNRLRSTALVSSAFFTPNPSAQEVTEAGAAAAARALPV
AGACSSESMAECDRLASVAAIRDDEHVDPAVEASMVTVHDNILMSEEKQRILLLERTLHM
KEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLY
FLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWN
RKV
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacaccgatctt
gctgtccaaactgtattggagcttaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagagacgagtctgc
agttacagtgctggcactgaaaccaaccccatattcctattcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctccattgagagtgagattcaggtc
aaggtggaggagtctctactgatgccagctgtctttcacaccgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaagaaactttgctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgctattatggctaatctggacgactgc
actctgtcttatcagaagttgcttgtgaaatttgacacctcatatgcaaattatcaacat
gacttggaagaaattaaggtgaaacttacaaagttagggacagcggtttctgtaatggct
aggatacctcttctggaaagtttgacaagacacagttacagagagagcgtagagaagtcc
acttccaccccagaaaaggattcagatgagacagaagaagaaaaatccactgactccatg
ccctgcactaccgatgcaaagaagccctccaatttatcagcatccatctctgcttcgggg
acagccacatgtgagccaactgctgaccaggaaacaaatgaaatgactgacagtggtgga
ctgagagctgcgctattagatgacgacactccagacttcgccaacccgtcctccttcaat
gtcacactattagactggatcaacgtgcaagacagacccaatgatgtggaatcagttgtg
aggaaatgctttgattccatcaataggcttgacccacggatcattcaacctttcctggca
gattgtcgtgacacaattgccaagctcgataatcaaaacatgaaagccatcaaggggctt
gaggacaggttgtatgctctagaccaaatgattgcgagctgtaagaagttggtaaatgaa
cagaaagaacttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggat
acatctgttctgcctgacttgtgtctgagtcacaccaaccagctgatgatcatgctgaac
aaccacagaaagctgctagacatcaaaaagaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagtccgactcaaatggtgctgctacgtgatgcttcatgcagaccaggat
ggcgagaagcttcaggctctgcttagacttctgacagagctgatcgaaagagtgcgagtg
gtggaggccctcagtactgtgccccagatgtactgcttggcagtggtggaagtcgtcagg
agaaaaatgtttatgcgccactacagagagtgggcttatgcacttgtgaaggatgggaaa
cgactgtatgaggcagagaagttcaaaagggaatcctttgggaaactcttcaggaagtct
ttcctcagaaatcgtttgtttagaggactcgattcatggcctccaacatcattctgtaca
cgaaagcccagaaggtttgacgatgaacttccagacatctcacttgaggacctgcagtac
ttgaaatcttgctgtcctgtagaggtgcagccattccttatggttcccacaatgtgcgac
tttgagcctttaaatcaccacgtagagacgcttcaccagctggtccaagcggcacagagt
gtggatgagatgtctcgaactatcactgacctgttaagcgaacaaagggcatcctgttct
cagagtgctcagagatcaaccgtgctgaccccacagtctgaaagtatacttggggccacc
acaccgatgtcctccaaaaccccttcctctcttagccttcagggacccagctgccggcct
ctacatgttcctgtcccagcccctctagaggacctgtccccagacagcattgacgcacaa
acatttgacttcgagaccattggccatccgaacatggatccagtcctgcagcagggctcc
cttgacctggattctctagcagagagccctgagtctgacttcatgtctgctgtcaatgag
tttgtgattgaagagaacatgaactctccgaaccctatcagtgaccccacgagccctgat
atgatggtggagtctctgtactcttcagtgatcaacgctattgacaacaagcgaatgcag
gataccacaacactagagagagagaacttaaggatcactgtcctcaaacaagtaatcgac
aagtaccagtctgctgcagaggagtcccattccaacttaagaagtgtgaaggatgacctc
tatcacttgcgaggtctagtgttaaaagaacaacatgactttggctttgtcctgaggagt
atgtgtacagaggtgcgcaacattgttgacaacttctcccagacccacgaactggagttg
aaggagcagcatgaaagcgagcttctctctgttcggcaagagcttgagaagcaggttcag
acactaacggaggaaaatcaagtgaaccagaatattgtcagagacgtccagcgcgcaatg
ctggagctggagggtcttatggagcgcaaagagaaagaacttactcatcttgagaacgag
agagagcgatgggttgaaacagagagtagccagacggataggatcaaaaacctggagcag
atgatgagcgatcaagctgaagagatcaagacactcgcagcttcaaaagactccctgacc
agccagctggagaatctgcactttgagattgaacgtggccagcagaagattcgacaggag
ttggaagttgctgagcaatctcaccttaaggagctggaggacagactgaaacaggaacac
aaggctgaactggagagccttaccaaggataaccaggacgctctggcaaatctggctgct
gaaaatagtgcaaagttaagtgaggcagctgatcaccataccaccgctcttagagagaag
gacaaccaaatcaaggacttggcggctcgtattactgagcttgcagaactccgctgcaaa
gtagaggtggagctagccctcaaagaatcggagacagaagaggtgaggctcctatttgag
gaggccaagattcagcaggctgaggctgtgaagtctcaggtagaggctgagacaaaggtc
cttagcgaagagctggcaggtatcaaaaaacagcttcaggtaaaaaatgaggagtatgaa
gtggacctagctgagctcaggactctcatgaggatcgagaaggaccactgcatctcagag
ctggtggacagacatgaggaggagactattttgttgcgcagcgagctctcatccctgcag
cagcaagcccaggatgatgagaggaaccatgctgagcagcagcagaaacttaagcaggaa
ttagaccagcaagtggagctaagtgaagaaaaagaaaagcagttgaggagcttccaagaa
ctggagcaagagctgaggacagtcatcaacaaattgcaggcagaaaatgacctgctctct
aaaaaactagagcaggacagacaagcagtcgagaaagatttagaaaaagaagaggccacc
aaggttgcatcaccagatgcctttaaagagttagagcaggagaaggaagacatggaaaag
agactgttagagaaaattaaacaacttgagaatgagcttcatgagagacgatccttaaaa
agtgatgaggggttgtcactgcatgccgaggggcgtgcagatgccggagcacccctgtct
ctggactcagcactacaagagcggctgcagcaggagagggcctccctgcagtcccagatg
gagctcctggagaagaagaagaatgaggagatgcagaacctcaagacatcacttatcgca
gagcagcagactaatttcaacactgttctaacccgagagaagctgaagaaggagcagatc
atcaatgagctcacagagaagttgcggaacgttacccaacagcaggagaaggacaaagct
ctgatagagacgctgtctgaggaccgggctagtgtcatgcaggagaagaaacacttggaa
gaagagcttaaccgcctgcgcagcactgcactagtctcctctgcctttttcactcctaac
ccgtcagctcaggaggtcacagaggctggagcagcagcagcagccagagctctgcctgtg
gctggggcctgctcttctgagtccatggcggaatgtgacagactggcctctgtggcggcc
attcgagatgatgaacatgtggatccagcagtggaagccagcatggtgacagtccatgat
aatatcctgatgtcagaggagaaacagcggatacttttacttgagaggactttacacatg
aaggaagaagaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcgtctgtg
tcgtcacggcattcagacaaaatcgccatcagagacttccaggtaggcgatttggttcta
atcatcctggatgaaaggcatgataactacgtgctgttcacagtcggtcccaccctctac
ttcctccactcagagtctctcactgcactggacctcaaaccagcatcggggacctcaaga
cggccgtgggtacttggaaaggtgatggagaaggaatattgccaggcaaaaaaggcccag
aacaggttcaaggttccattaggaaccaagttctacagagtgaaagctgttccatggaac
agaaaagtataa
DBGET
integrated database retrieval system
