Seriola lalandi dorsalis (Yellowtail amberjack): 111653600
Help
Entry
111653600 CDS
T06058
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111653600 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111653600 (smarca5)
03036 Chromosome and associated proteins [BR:
slal03036
]
111653600 (smarca5)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
111653600 (smarca5)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
111653600 (smarca5)
RSF complex
111653600 (smarca5)
WICH complex
111653600 (smarca5)
B-WICH complex
111653600 (smarca5)
NORC complex
111653600 (smarca5)
BRF complex
111653600 (smarca5)
NuRF complex (fruit fly)
111653600 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
111653600
NCBI-ProteinID:
XP_023259984
Ensembl:
ENSSLDG00000025190
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MSESANCVEQREEQTELEEAGGAEEKSDSSDAGKESSSDAGQDASSSSSSKTKDSAPGYE
EKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGEY
DSNRHRRTEQEEDEELLNESTKTTNVCARFDESPSYVKTGKMRDYQIRGLNWLISLYENG
INGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRAV
CLIGDRDERTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKS
KLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGDQ
KLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNSA
GKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKIAVLDKLLPKMKAQ
GSRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINAYNEPNSSKFIFMLS
TRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIV
ERAEMKLRLDSIVIQQGRLVDPSANKLGKDEMLSIIRHGATHVFASKESEITDDDIDEIL
ERGEKKTMEMKEKMSSLGESSLRNFTMDTENSSVYTFEGEDYREKKKVITNWIEPPKRER
KANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGY
KVPRNPDMPNSAQVQKEEQAKIDEAEALAEEELEEKENLLQQGFTIWNKRDFNQFIKANE
KWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIK
KALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIR
NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQKRKS
EGTPDGRGRRKKLKL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgcaaactgcgtggaacagcgggaagagcaaactgaacttgaagaagct
ggaggagcagaggagaagtcagactcttcagatgctggaaaagagtcctcctcagatgct
ggacaagatgcatcctcctcctcctcatccaaaactaaagattctgctccaggttatgag
gagaaagtgcaaactgaccggaccaacagatttgagtacctgttgaagcaaacagagctg
tttgctcatttcatccaaccagccgcacagaagacccccacctcccccttgaagatgaaa
ccaggacgtcctcgcatcaagaaagatgagaaacaaaacctgctgtctgctggagagtat
gacagtaatcgccatcgccgcacagagcaagaggaggacgaagagcttctgaacgaaagc
accaagactactaatgtctgcgctcgctttgatgaatctccctcctatgtcaaaacaggg
aaaatgagggactatcagatccgtggcctgaactggctcatttctttgtacgaaaatggc
atcaatgggatcctcgctgatgaaatgggtttgggaaagactctccaaactattgccctg
ctgggttatatgaagcactacagaaacatccctggtccccacatggtgctggtgcccaag
tccactctgtacaactggatgaatgagttcaagcgatgggtgccttctcttcgtgcagtc
tgcctgatcggagacagagatgagaggactgccctgatcagagatgtgctgctgccagga
gagtgggacgtgtgtgtcacatcctacgagatgctcatcattgaaaaggccgtgttcaag
aaattcaactggagatacctggttattgatgaggcccacaggatcaagaatgagaaatcc
aagctttcagaaattgtgcgagaattcaagaccaccaatcgtttactgttgactggaacg
cccctgcaaaacaacctccatgagctgtgggctctgctcaacttcctgctgcctgacgtc
tttaactcctcagaggactttgactcctggtttgacacaaacaactgcttgggtgaccag
aagttggttgaacgtcttcacactgttctgcgtcctttcttgctccgtcgtataaaagct
gatgtggaaaagactctgctccctaaaaaagagatcaagatgtatgtgggcctgagcaag
atgcagcgagagtggtacacaaagattctgatgaaggacattgacattctgaactcggcg
ggtaagatggacaagatgcgtctgctgaacgttctcatgcagctcaggaaatgctgcaac
cacccgtacctgttcgacggagccgagccaggtccaccctacacaactgacctccacctg
gtggtcaacagcggcaagattgcggtgctggacaagctgctacccaagatgaaggcgcag
ggttcccgtgtgctcatcttcagtcagatgaccaggatgctggacatcttggaggactac
tgcatgtggaggaactatggatactgtcgcctggatggtcagacacctcacgaggaaaga
cagatctctatcaatgcatacaatgagcccaacagctctaagttcatcttcatgttgagc
accagagctggtgggctgggtatcaacctggctacagctgatgttgtcatcctctacgac
tcagactggaaccctcaagtcgacctgcaggccatggaccgagctcacaggattggtcag
cagaagcaggtgcgcgtgtttcgtttcatcaccgaaaacaccgtggaggagaggattgta
gagagggccgagatgaaactgcgcctggactccattgtcatccagcaaggaagacttgtg
gatccaagcgcaaacaagctgggaaaggacgagatgctgtccatcatccgccacggtgcc
acacatgtgtttgcttccaaagagagcgagatcacagatgatgacattgatgaaatactg
gagagaggtgaaaagaagactatggagatgaaggagaagatgtcttccctgggtgaaagc
tctctgagaaacttcaccatggatacagagaacagcagcgtgtacacatttgaaggagag
gactacagagagaagaaaaaggtcattaccaactggatcgagccacccaagagggaaagg
aaagccaattacgctgtggatgcctacttcagagaagccctgcgagtcagtgagcccaaa
gcacccaaggctcctcgtcctcccaagcaaccaaatgtgcaggacttccagttcttccct
ccgcgtctctttgagcttctagaaaaggaaattcttttctataggaagaccataggctac
aaggttccccgtaatccggacatgccgaactcggctcaggtgcagaaagaggaacaggct
aagattgatgaggccgaggcgctcgcagaggaagaactggaggagaaggagaacttgctg
caacagggatttaccatttggaacaaacgcgacttcaaccagttcatcaaagctaacgag
aagtggggaagagatgatattgagaacattgccagagaagtggagggaaaaactccagaa
gaagtcatggaatattctgctgtattttgggagcgctgcaatgagctgcaggatatcgag
aagatcatggcccagatagagagaggagaagccaggattcagagaaggataagcatcaag
aaagcacttgactcaaagattggtcgctacaaggctcccttccatcagcttcgcatctcc
tacggcaccaacaaaggcaagaactacacagaggaagaggaccgcttcctcatctgtatg
ctccacaagcttggctttgacaaggagagcgtgtacgacgagctgcgtcagtgcatccgt
aactcgcctcagttccgcttcgactggttcctcaaatccaggactgccatggagctccag
aggcgatgtaataccctgattacgctgatagagagagagaacatggagctggaggagagg
gagaaggcagagaaaaagaaacgaggcccaaagactggctcggcccagaaacgaaagtcg
gagggaaccccagatggtcgtggacgcaggaaaaagcttaagttgtga
DBGET
integrated database retrieval system
