KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111653822
Entry
111653822         CDS       T06058                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111653822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111653822
   03036 Chromosome and associated proteins [BR:slal03036]
    111653822
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111653822
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     111653822
    COMPASS/SET1 complex (yeast)
     111653822
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_HPS5 Beta-prop_DCAF4 MinC_C VPS8_N
Other DBs
NCBI-GeneID: 111653822
NCBI-ProteinID: XP_023260289
Ensembl: ENSSLDG00000009365
UniProt: A0A3B4X2L5
LinkDB
Position
Unknown
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctcacggacaatgtgctgcggagcttcagggttgctaaggtgttccgagaaaac
tcagacaaaattaactgcttcgacttcagttcaaacggagaaacaattatttccagcagc
gatgacgattctttggtcttgtacgactgtcaagagggaaaacccaagaggaccctctac
agtaaaaagtatggagtggatctgatcagatacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgatactatccggtacctgtcccttcatgacaacaaatacatc
cgctattttccagggcataacaaaagagtgacatctctctccatgtctcctgtggacgac
acatttatttctggctcattagacaaaactatccgactatgggatctccggtcacctaac
tgccagggtctgatgcacctgcaggggaagccagtgtgctcctttgatccagagggtctc
atttttgccgctggaataaattcagagatggttaaactttatgacctgcggtcatttgac
aagggtccctttgcaaccttcaagctccagtatgatcggacatgcgagtggacagggctg
aagtttagcaacgatggaaaactaatccttctttctactaatggcggggctcttcgcatc
ttagatgcttttaagggtgctgtgctacattcctttgggggctacaacaacagtaaaggt
gtaacactggaggcatcattcactcctgactctcagttcgttatgatcggctcggaggac
ggaaagatccacgtgtggaatgcagagagcggtatgaaggtggctttattagatgggaag
cacacaggaccaattacctgcctgcagttcaaccccaagttcatgacatttgcaagtgcc
tgctccaacatggcattctggctgccaaccattgatgactga

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