Seriola lalandi dorsalis (Yellowtail amberjack): 111653837
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Entry
111653837 CDS
T06058
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111653837 (upf3a)
03015 mRNA surveillance pathway
111653837 (upf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111653837 (upf3a)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111653837 (upf3a)
mRNA cycle factors
P-body specific factors
111653837 (upf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
111653837
NCBI-ProteinID:
XP_023260309
Ensembl:
ENSSLDG00000009700
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MRSEKDQMTVGKEKNVVEIQFRDIPREQENTPCNPKQKEEKKEVFTKVVIRRLPPNLSKD
QLEEQLSPLPSYDYFEFFPADQSLYPHLFSRAYINFKNPEDILLFRDRFDGYVFIDNKGQ
EYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYKRFLENYSCDEEKSMANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKIEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLSDKDIKIKLLKKSDRDDDVDSDRMKDKSDIGETDRGKWEKAGGQMKSK
DPKEKGQPESDKEQREQHGRRQRDKDHRGKDEERKRQRHHYEFDKFMRRKDETKWGKGYC
QDRAKKEGHHHGFSYCPDSGDKLGKEDREDLGNRKERLRNKVSEKDRPAMQLYQPGARNR
KRMSSAGKGYDCIPVGPSPEPGTEHCYEVATMATGLEKGFEKSKDEQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaaaaggaccaaatgaccgtgggcaaggagaaaaacgtcgtcgagatacag
ttcagggacatcccgagagagcaagaaaacacaccgtgtaaccccaagcagaaagaagag
aagaaagaagtttttacaaaggtggtgattcgaaggctcccaccaaacctgtcgaaggac
caactagaagaacagctcagtccactgccgtcatatgactattttgagttcttcccggca
gatcaaagtctctatcctcacctgttctccagagcgtacatcaatttcaaaaaccctgaa
gatatcctgctgtttagagaccgatttgacggctatgtcttcattgacaacaagggccag
gagtatcctgccgtggtggagtttgcccccttccagaaaatttctaagaagaagctaaaa
aagaaagatgccaaagctgggagtatcgaagaagatccagaatataagcggttcttggag
aattactcctgtgatgaggagaagtctatggccaatcctgagactctgctgggagagata
gaggccaagaccagagagctcatagccaagcgaacaacacccctattagagtacatcaaa
aacaagaaaatcgagaaacagagaataagagaggagaagagagaggagaggaggagaaga
gagcttgaaaagaaacggcaaagggaggaggagaagagaaagcgacgagaggaggagaga
cgcaaacggaaagaggccgagaagcagaagaaattgtctgataaagacatcaaaatcaag
ctcctgaagaagagtgacagagacgacgatgtggactcagaccgaatgaaagacaaaagt
gacattggggagacagacaggggaaaatgggagaaagctggaggacaaatgaagtcaaag
gaccccaaagaaaaaggccagcccgagagcgacaaggagcagagagagcagcacggacga
cgacagagagataaggatcaccgtgggaaagatgaagagcggaaacggcagcgacaccac
tatgagtttgataagtttatgcgccgcaaagatgaaaccaaatgggggaagggctactgc
caggaccgagccaagaaagaggggcatcatcatggcttctcttactgtcctgacagtgga
gacaaactaggaaaggaggacagggaggacctgggtaataggaaggaacgcctccgaaac
aaggtgagcgagaaggaccgtccagccatgcagctctatcagccaggcgcacgcaaccgc
aagcgcatgagttcggcaggcaagggctacgactgcatccctgtgggcccctcacctgaa
cccgggacagagcattgctatgaggttgccactatggcaacagggctggaaaaggggttc
gagaaaagcaaagacgagcagtga
DBGET
integrated database retrieval system
