Seriola lalandi dorsalis (Yellowtail amberjack): 111653873
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Entry
111653873 CDS
T06058
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03030
DNA replication
slal03420
Nucleotide excision repair
slal03430
Mismatch repair
slal03440
Homologous recombination
slal03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111653873
03420 Nucleotide excision repair
111653873
03430 Mismatch repair
111653873
03440 Homologous recombination
111653873
03460 Fanconi anemia pathway
111653873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111653873
03032 DNA replication proteins [BR:
slal03032
]
111653873
03400 DNA repair and recombination proteins [BR:
slal03400
]
111653873
Transcription factors [BR:
slal03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111653873
DNA replication proteins [BR:
slal03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111653873
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111653873
MMR (mismatch excision repair)
111653873
DSBR (double strand breaks repair)
HR (homologous recombination)
111653873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Pox_vIL-18BP
RADX
A_deaminase
Motif
Other DBs
NCBI-GeneID:
111653873
NCBI-ProteinID:
XP_023260365
Ensembl:
ENSSLDG00000011806
UniProt:
A0A3B4XG24
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MTKLSEGAIESLSNGTGGNDAVLQLVNIRKIDGGNGPARFRVMMSDGRHTLSSFMLSTQL
NCLAEENRLAPNCICVLKRHVTNILKDGRRVVIILEIDVIKPAEEVAGKIGDPTAYTEGH
AKGPQSAPNPESRPPLHPQNRNEVNRGFSRDFGKKPPSAMPSTQGGSSKVVPIASLNPYQ
SKWTIRARVTNKSTIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVDKFYSLIEVGKV
YYISKCSLKIANKQYTSVKNDYEMTLNGESSVIPCEDSSDVPMVQCDFISIGDLENRDKD
AVVDVIGVCKSVEEVTRLTTKSNREVSKRTLNLMDMSGKVVTVTLWGEEAEKFDGSGQPI
VAIKGAKLSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHAMDGQSLTELKGGSG
GGNTNWKALSDVKTEHLGHGDKADYYTCIATIVYLRKENCLYQACPSQDCNKKVVDQQNG
MFRCEKCDKEFPNFKYRLILSANIADHGDNQWVTCFQESAEAILGQNAAYLGQLKDSNET
AFDEIFQQANFNTFVFRNRVKLETYNDESRIKATVMDVKSVDHKDYSKRLIMNIRKLAAQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctctcagagggtgcgatagagtctctgtcaaatggcaccggtggcaacgac
gcagtgcttcagttggtgaacattcgcaagattgatgggggaaacggtccggctcgcttt
cgggtgatgatgagtgatggacgccacactctgtcctccttcatgctttccactcagctg
aactgcctggcagaggagaacagactggcccccaactgcatctgtgttctgaagaggcat
gtgaccaacatactgaaggatggacgtcgggtggtaatcattttggaaattgatgtcatc
aagcctgctgaagaagttgctgggaaaataggcgaccctactgcttacactgagggtcac
gctaaaggcccgcagtcagctccaaaccccgaaagccgccccccactgcacccgcagaat
agaaatgaagtgaacagaggtttcagtagagactttggaaagaagcccccatctgctatg
cccagtactcaagggggaagctccaaagttgtgcccattgccagcctcaacccctaccag
tccaagtggaccatccgtgctcgtgtaaccaacaagagcaccatccgtacatggagcaac
tctcgtggtgatggcaaactcttctccatggagattgtggatgagagtggagagatacga
gtgactggcttcaaccaagaggtggacaagttctacagcctaattgaggttggcaaggtc
tactacatctccaaatgctccctgaagatcgccaacaaacagtacacatcagtgaagaat
gattatgagatgacgctcaatggagagtcctcagtcatcccctgtgaagacagcagtgat
gttcccatggtgcagtgcgacttcatctctattggtgacctggagaacagagacaaagat
gctgtcgttgatgtgattggagtttgcaagagcgtggaagaggtcacccgcctcacaaca
aagtccaacagagaagtgtcaaagaggacactcaacctgatggacatgtctgggaaggtg
gtgactgtcacactgtggggagaggaagcagaaaagtttgatggctctggacagcccatt
gtagccattaagggggcgaagctttcagactttggaggccggtcgctctctgcatccttc
agcagcaccctgatgatcaacccagacatccctgaggcatataagctcagaggctggtat
gacaaggagggccatgccatggatggacagtctctgacagagttgaaaggtggcagtggg
ggaggaaacaccaactggaaggctctatctgacgttaagaccgagcacctgggacatgga
gacaaggctgactactacacctgcattgctaccattgtgtacttgcgcaaggaaaactgc
ctttaccaggcctgcccgagccaagactgcaacaagaaagtggtagaccaacagaacggc
atgtttcggtgtgaaaagtgtgacaaagagttcccgaacttcaagtaccgcctcatcctg
tctgccaacattgcagatcacggagacaaccagtgggtgacttgcttccaggagagtgca
gaggccatcttgggccagaatgcagcttacctggggcagctcaaggactcgaatgaaact
gccttcgatgagatcttccaacaagccaatttcaacacgtttgtcttccgcaacagagtg
aagctagaaacgtataatgatgaatccaggatcaaggcaacagtaatggatgtgaagtct
gttgaccacaaggattacagcaagaggttgatcatgaacataaggaaactggctgcgcag
tag
DBGET
integrated database retrieval system
