Seriola lalandi dorsalis (Yellowtail amberjack): 111653934
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Entry
111653934 CDS
T06058
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111653934 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
111653934 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111653934 (thoc2)
03041 Spliceosome [BR:
slal03041
]
111653934 (thoc2)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111653934 (thoc2)
Spliceosome [BR:
slal03041
]
Complex C
Other components
EJC/TREX
111653934 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111653934 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
111653934
NCBI-ProteinID:
XP_023260452
Ensembl:
ENSSLDG00000015816
UniProt:
A0A3B4XX03
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKDLTEKTDHGSEVKDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHKLIELEDLYVHLMPQDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSDDKEKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGVPKGARGCIMHPLRNKRAPRPAESFE
DLRRDTFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQSDGRPDVKDKLETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGSVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPTRVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KAQIKAIEENPEIPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPATSTSKTEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKNKEKGDRSGVAGSLKLPVPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHVNYNSVARSKSRERETEKKESEN
TQGRSKEKKEEKDRKDRKRDHAVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSY
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaagaccttacagagaaaacagatcatggaagtgaggttaaa
gatatacaggccgccttatacgagctatgttggcaagttgtacaggggaacctcaagttg
gatcttgtcgccagcgtccttggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgtgttcagtatactagatttagagactggtgcactggaagaaaaaaacaaa
cgtgatcattatacacaattggtgggagcatgtttgttttttgttccagaggccatcctg
aaagagaggctggatccagaaacccttgaatctcttggactaataaaacaagcccatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctatgccaaactcatcactgagcttggccaagacctg
tcaggcaacatcaccagccacctcgtcctggagagcatcaagtccctcataggatgtttc
aacctagaccctaatcgtgttttggacataatcctggaggtgtacgagagtcgctctgac
caagatgagttcttcctgtctctcattaagtcctacatgtgtgagccactcaccctttgc
cacatcttgggcttcaagttcaaattctaccaggagcccaatgaggaaacccctaagtca
ctttaccacattgctgctgctctgcttcaccacaagctgatagagctggaggatctctat
gtacatcttatgccacaagatgccaccattgtagaggaacacaaacgagatatctcagag
gccaaacagattgcacgcaagttggtcatggttgtgctgccctcagagaagagtgacgac
aaagaaaaggagaaagagaaggaagaggaaaaaaatgacaagccacctgataaccagaag
cttggtctgttggaagcactgcttagaattggagactggcaccacgcccagagtattatg
gaccagatgccttccttctatgctacttctcacaaggccattgccctggcactctgccag
cttgtgcacctgactgtggaacctctttacagaagggctggcgtcccaaagggggcaaga
ggatgtataatgcatccactgaggaacaagcgagcccctcggcctgcagagagttttgaa
gacctacgcagggacacgttcagtatgctctgctacctgggccctcacctctcccacgac
ccaatcctctttgccaagatcgtgcgtctgggcaagggcttcatgaaagagtaccaaagt
gatggcagacctgatgttaaagacaaactggaaacactgctgagttgtttcctgagcatt
gcagaccaggtgctactcccttctctctccctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtcttttcaagctgtttccctaccagcacaggtaccggttatatggacag
tggaagaatgagacgtattccagccatccgctgttggttaaagtcaaagcacagactgtg
gaaagggccaaatacattatgaagcggttgaccaaagaaaatgtgaaacaatctggaagg
cagattggcaaactgagccatagcaatcccaccatcctctttgattatatgctgtctcag
attcagtggtacgacaacctcatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcattattgaagctctagccaatccagagaaggaa
aagatgaagcatgatgacaccaccatctcctcatggcttcagagcctggcaagtctgtgt
ggatccgtgttcagaaaatacccaattgaactggctggccttcttcagtatgtcaccaat
caactaaaagcagggaagagttttgacctgctgatcctgaaagaggtggtgcagaaaatg
gccggcatcgagatcacagatgagatgacctcagagcagttggaggccatgaccggaggg
gagcaactcaaagctgagggcggctactttggccagatcaggaacactaagaagtcatca
caacgtctgaaggatgcactgctggaccacgaactggccctgccactgtgtctactcatg
gctcagcaacgaaacggagtggttttcttagaaggtggagaaaaacatcttaaacttgtt
ggccatctctatgaccagtgccatgacactttggtgcagtttggtggttttctggcctcc
aacctcagcacagaagactacatcaagcgagttccctctattgacatcctttgtaaccag
ttccacactccacatgatgctgccttcttcctgtctcgtccaatgtacgcccatcagatt
ttgtctaagtacgatgagctgaagaaagcagagaaaggcaaccggcagcagcagaaggta
cacaagtatgtggcagcctgtgaacaggtgatgacaccggtgcacgaggctgtggtgtcc
ctccatcctaccagggtctgggacgacctccgccctcagttctacgccacattctggtcc
ctcaccatgtatgacctggctgtgcctcattctgcctatgaacgtgaggtcaacaagctc
aaggcccagatcaaggccatcgaggagaatccggagatacccttgaataagaaaaagaag
gagaaggaacgctgcactgccctacaggaaaaactgcaagaggaggagaagaagcagctg
gagcacgtccaaagggttctacaccgcctcaaactagagaaagacaactggttgttggcc
aaatccacaaagaatgagaccataacaaagttcctccagctctgtctgttcccgcgctgc
atcttctcttccatcgacgctgtgtactgtgcccgctttgttgagttggtccaccagcaa
aagacacccaacttctgcacccttctgtgctatgacagggtgttctctgctatcatttac
accgtggccagctgtactgagaatgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacggtgacccgttggcacagtgaccgtgcaatctatgagaaggagtgtgtcaat
tacccaggcttcctgaccatcttcagagccacaggcttcgacggagggaacaaagcagat
cagctcgattatgagaacttcagacatgtggtgcacaaatggcactacatgctgactaaa
gcttcagttcactgcctggagaccggagattacacccacatccggaatattctcatcgtg
cttaccaagatcctgccctgctaccccaaggtcctgaacctgggccaagcactggagtgc
cgagtccacaagatctgcctcgaggagaaggacaagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggttcctgagaatgagttt
caccacaaggagcagccagcacgcagtgccacccctgcaagtcaacagaacggccccggc
agcacaggcaagcctgccaccagcacaagcaagacagaggaggggacgtcagaggatggc
gatcgaggaaaggacaaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagccgttaaa
gaacgggatgacaaagagaagagcggtaaagagaaaaaagagaaaaaggaaaagacaccg
ggcagcactcctgagacaaaggcggagaaccgtcgagagaagcagagagacgagagggca
gggaaggaggagcgggcggcacgtgagggtaaggaaaagacccccaaggcagacagggag
aaagtgaaggccgaggagaagagcagcaaagatgacaaggccaaagccggcaacggggag
cccatggagccgtccagggagcgtgacgccatcaaggagtccaagaacaaggagaaggga
gacaggagcggtgtggctgggtccctaaagttaccagttcccagatcagaatcagctgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgtcaactac
aattcagtagcccggtccaagagcagagagagggagacggagaagaaagagtcagagaac
acacaaggccgatccaaagagaagaaggaagaaaaggatcggaaagacaggaaacgagac
catgctgtcaatgaccgtgagacaagccaagaatccaaacgtagaaaggatgagaatgga
accaattcctccaaaaacagcaagagcacgagtccttcctgtgactctccactttcagct
gaaaaagagaagagcaaaagatccaaatcttccagtaaagagaaggccgagtctgtgaaa
cctgagcgaacgtcctccggaggcaaaaaggagtccagacacgataaagagaaatctgag
aagaaagaaaagagggacagcagcggaggaaaggaagagaaaaagcatcataaatcctat
gacaagcacagataa
DBGET
integrated database retrieval system
