Seriola lalandi dorsalis (Yellowtail amberjack): 111653959
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Entry
111653959 CDS
T06058
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111653959
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
slal01001
]
111653959
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111653959
03036 Chromosome and associated proteins [BR:
slal03036
]
111653959
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
111653959
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111653959
Protein kinases [BR:
slal01001
]
Serine/threonine kinases: Other
TAF1 family
111653959
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111653959
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
111653959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
111653959
NCBI-ProteinID:
XP_023260507
Ensembl:
ENSSLDG00000016553
LinkDB
All DBs
Position
Unknown
AA seq
2000 aa
AA seq
DB search
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEDDSVLDNESKKHLAGLGTLGLGSLITEIT
ANEDGDQEENRDSSSVDAEGWVKSTEDAVDYSDISEVAEDETKKYRQAMGSLKPSRKTDD
EDDYDADCEDIDSKLMPPPPPPSLPTSAKKDESSSQTTTVVGEEGDGIILPSIIAPSSTA
DKVDFSSSSDSESETDRPGQGSGVGGSPDRLNLPLAGIMQKDAAKALPSVTELFPEFRPG
KVLRFLRLFGPGKSMPSVWRSARRKKKRKHRDAQPGTPPPEGEPTEQNQEKKSGWIYEYA
TPPPPEQCLSDDEITMMAPVESKFSQTCGDGDKETESRPKVAEWRYGPAQLWYDMLGVPE
DGSSFNYGFKLKDEQSSEPQIQETPKEITETVQEFQRQDDSNDDGDNHDNDDGDEDRAAL
ENELFLMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLSRS
NSQLVPPTPPPMPKISSISGSKREKNNHDNQGEFIFGSKSSQEEDCPWFSIFPIDNEELV
YGRWEDNIIWDDQEMDHMLIPPVLTLDPNDENIILEIPDEKEETTSHSPSKENKKENAIK
KSRILLGKTGVIKDEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAL
ELRQPFFPTHMGPMKLRQFHRPTLKKYSFGALAQPGPHAVQPLLKHIKKKAKMREQERQA
SGGGDMFFMRTPQDLTGKDGDLILAEYSEEYAPLIMQVGMATKIKNYYKRKPGKDPGAPD
CKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVLRTRHGYYIREI
VDIIVVGQECPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPS
HSESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQ
RLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADP
TGCGEGFSYVKVPNKPTQQKDDKEPQPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEE
IKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKV
LESTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGE
ESDRDNKGRKERRKGLSSSLSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYV
RCETVRKASVIDAYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEK
DKIKGPPEKKAKKVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEE
QEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRV
GSAVHCDYLNKPHKAIHRRRTDPMVTLSSVLESIINDMRDHPNTYPFHTPVNAKVVKDYY
KIITRPMDLQTLRENVRKRMYPSREEFREAVEVIVKNSATYNGAKHPITQVAQSMLDLCD
AKLKEKEDRLVRLEKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVP
DYYKVIVNPMDLESIRKNISKHKYQNRDAFLSDVSLIHTNSIKYNGPDSPYTKTALDIVN
VCKQTLAEYDEHLTQLEKDISTAKEAALDAADLESLDPMTPGPYTPQPADLFDSGASGSL
PREPSSLFSEGPLVVAPEKRGGQGRHSRRPGEEESDVDIEGFEEEDDGKPKTPAPAEDAE
GDLEDEDDEEEMLLPPRRRVHDQEEEEEEEEDDEGRSNRPAQASVLYQDLLMSDGEDDAS
EEEGDNPFSSIHLSESGSDSDREVDVRPPPPRRAQETARMGMEQDESMMSYDGDGPDEPH
MEDSNVSYGSYEETESRSQMQPSSMGNGEEYGISEEEEEDEEDEARRRGPAVLSQVQLSE
DEESEEFRSIGGDSDMDSDN
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctgacagtgacgaggatcaagatcgcccattctctctaacgggcttcctc
ttcggaaacatcaacgaagatgggcagctagaggatgacagtgttctggacaatgagtcc
aaaaagcatctggctggtttgggtactctgggtctgggctcactcattacagagattact
gctaatgaagatggtgatcaggaggaaaacagagactctagtagtgtggatgctgaaggt
tgggtgaaaagcactgaggatgcagttgattattctgacatcagtgaggttgctgaggat
gagacaaagaagtaccgtcaggccatggggtctttgaagcccagcaggaaaacagatgat
gaggatgactatgatgctgactgtgaggatatagattctaagcttatgccacctccacca
ccaccaagtctccctacatctgctaagaaagatgaatcctcctctcagaccacaactgta
gtcggggaagagggcgatggcatcatcttgccctcaattattgcaccatcctctacggct
gataaggttgacttcagcagctcctctgactctgagtcagaaacggaccgtcccggccag
ggctccggggtcggaggatccccagacaggctcaacctccctcttgctggcatcatgcag
aaggatgctgccaaagcactgccaagtgtcacagagcttttcccagagtttaggcctgga
aaggtgcttaggttcttaaggctgtttggtcctggaaagagcatgccatcagtctggagg
agtgcccgtaggaagaagaaacggaagcaccgggacgctcagcctggcacacctcctcca
gaaggagagcccacagagcaaaaccaggagaagaagtctggatggatttatgagtatgca
actcctccaccaccagagcaatgtctctctgatgatgagataaccatgatggctccagta
gaatctaagttctcacaaacttgtggcgatggggacaaggagaccgagtctcgacctaaa
gtagcagaatggagatatggtccagcccagctctggtacgatatgctaggcgtcccagag
gatggaagcagtttcaactatggcttcaagctaaaagatgagcagtccagtgagcctcag
attcaggaaacacctaaagaaataaccgagactgttcaggagtttcagaggcaggacgac
agcaatgatgatggtgataatcatgataatgatgatggagatgaggacagagctgccctt
gagaacgagctcttcctgatggttactcaactgcaatgggaggatgatattatctggaat
ggggaggacgtaaaacacaagggtacaaagactcagcgagccagcctggcaggatggcta
ccttctagtatgacacgcaacgccaatgcttacaatgctcagcaggggctgtcaagaagt
aattcgcaattggtgccacctacacctccacccatgcccaaaatttcttcaatctctggc
tcaaagcgggaaaaaaacaaccatgataatcaaggtgaatttatttttgggtcaaaatcc
tctcaggaagaagactgtccttggttctccatttttcccattgacaatgaagagttagtt
tacggacgctgggaagacaacattatttgggatgaccaggagatggatcacatgctcata
ccacctgttctcacactggatcccaatgatgagaatatcattctagaaattcctgatgaa
aaggaggaaacaacgtcacattccccatcaaaagaaaataaaaaggaaaatgcaatcaaa
aagagccgcatcctattgggaaagactggggtgataaaagatgagccacagcagaacatg
tcccagcccgaagtgaaggacccctggaacctttccaatgacgagttctactatcccaaa
cagcagggcctgagggggaccttcggcggaaacatcattcagcactccatcccggcactg
gagctgaggcaacccttcttccccactcacatggggcccatgaagcttcgccagtttcat
cggccaactctgaagaagtactcatttggagcattggctcagccaggtcctcatgctgtc
cagccgctgcttaaacacatcaagaagaaggccaagatgcgagagcaggaacggcaggca
tcaggtggaggagacatgttcttcatgcgaacaccacaggacttgacaggcaaagatgga
gatctgatcctggcagagtacagtgaggaatacgcccctctgatcatgcaggtcggcatg
gccactaagatcaaaaactactacaaaaggaaacctggaaaagatcctggagcacctgac
tgtaaatatggagagactgtgtactgccacacatcccctttcctcggttctctgcatcct
ggacagctgctccaggcgtttgaaaacaaccttttccgtgctccaatctacctgcacaag
atgccagagactgatttcttggttctccgaacacgacatggctactacatcagagagatt
gtggacattattgtggttggtcaggagtgccccttgtttgaggttcctggtcccaactcc
aaacgagccaatacccacatcagggacttccttcaggtgttcatttaccgcttgttctgg
aagagcaaggatcggccccggaggatccgcatggaggatataaagaaagcatttccttca
cactcggagagcagcatcagaaaacgactaaaactctgtgctgacttcaaacgtacaggg
atggactcgaactggtgggtgctgaagcctgacttcagattacctacagaagaagagatc
agagccatggtgtctccagagcaatgctgcgcttactatagcatgctggtggccgagcag
agactcaaggatgctggatatggtgagaaatccttctttgctccggaagaagagaacgaa
gaggactttcaaatgaagattgacgatgaggtgcgcacagctccatggaacacaacaaga
gccttcatctctgccatgaaggggaaatgcctgttggaggttacaggagtggctgatcct
acaggctgtggagagggtttctcctatgtcaaagtgcccaacaagccaactcagcagaag
gatgacaaagagccacaacctgccaagaagacggtgactgggacagacgctgacctgagg
agactctcactgaagaatgccaagcagctgctgcgcaagtttggtgttccagaggaagaa
atcaagaagctctctcgctgggaggtgattgacgtggtcaggaccatgtctacagagcag
gcacgttcaggtgagggacccatgagcaagtttgccagagggtctcgtttctctgttgct
gaacaccaggagcgctacaaggaagagtgtcagaggatctttgacctgcagaacaaggtg
ttagaatcgacagaggtgctctccacggacacagacagcagctcagcagaggacagtgac
tttgaagagatggggaagaacattgagaacatgctgcagaacaagaagaccagctcccag
ctttcccgtgagagagaggagcaggagaggaaggagctgcagaggatgctaatgggcgag
gagagtgaccgtgacaacaaaggacgcaaggagcggcgcaaaggcttgtccagttccttg
tccaccagctcacacaaggacgacgatacgtcctctgtcacaagcctaaactcttcggcc
acaggacgacggctgaagatctatcgcaccttcagggatgaggacggcaaggaatatgtc
cgctgtgagacagtacgcaaggcatcagtcattgatgcctacaccaggatcagaaccacc
aaggatgacgaattcatacgaaagttcgccctcttcgatgagcaacacagagaggagatg
aggaaggagcgcagacgtattcaggagcagttgaggagactgaagagaaaccaagagaag
gacaagatcaagggacccccagagaagaaggccaagaaggtcaaagagagaccagacctc
aaggtaaaactaaagtgcggcgcatgtggagccataggacacatgaggaccaacaagttc
tgcccactgtactatcagaccaatgccccgccttctaacccagttgccatgacagaggag
caggaggaggagctggaaaagaccgtcatccacaacgacaatgaggaactgatcaaagtg
gagggcaccaagattgtacttggcaaacagctcattgagagtgctgatgaggtccgcagg
aagtctttagtgctcaagttccccaagcaacagctcccaccaaagaagaaaagacgtgta
ggcagtgctgtgcactgtgactatctcaataaaccacataaggccatccaccgcagacgc
actgaccccatggtgaccttgtcttctgtgctagagagcatcatcaacgacatgcgcgat
caccccaatacatatccattccacacaccagtcaacgccaaggttgtaaaggactattat
aagatcatcactagacccatggacctgcagacactgagggagaatgtacgcaaacggatg
tacccgtcgagggaggagttccgtgaagcagtggaggttatcgtcaaaaacagcgccacc
tacaatggggcaaagcatccgataacacaggtagcacagtccatgctggacctgtgcgat
gctaaactgaaggagaaggaggacaggctggtgaggctggagaaagccatcaacccactg
ttggatgatgatgatcaggtggccttctccttcatcctggacaacatagtgacccagaaa
atgatggtggttcctgattcatggccattccatcatcctgtcaacaaaaagtttgtgcct
gattattataaggtgattgtaaaccccatggatctggaatccatccgcaagaacatctca
aaacacaaataccagaaccgagatgccttcctttcagatgtcagtcttatccacaccaac
agcatcaagtacaatggcccagacagtccttacaccaagacagccctggatattgtcaat
gtgtgcaagcagaccttggcggagtacgatgagcacttgacccagttggagaaggacatc
tcgactgctaaagaggcagctctggatgcagcagacttggagagtctggacccaatgact
ccagggccatacacaccacagcctgctgatctgtttgacagcggggcttcagggagtctg
cccagagagcccagcagccttttctctgagggacctctagtggttgctccagagaagaga
ggggggcagggacgccacagcagaagacctggggaggaagagtcagatgtggacattgaa
ggctttgaggaggaagatgatggcaaacccaagactcctgctcctgcagaggatgcagaa
ggagatcttgaggacgaagatgatgaagaggagatgttactgccacctcgcagacgggtg
cacgaccaggaggaagaagaggaggaggaagaagatgatgaaggaagatcgaaccgccct
gcccaagccagcgtgctgtaccaggacctgctcatgtctgatggagaggatgacgccagt
gaagaggagggcgacaaccctttctcctccattcacctgtcggagagcggcagcgactct
gacagagaggtggatgtgcgacctccacctccacggagagctcaagagacagcacgcatg
ggtatggagcaggatgagagcatgatgtcatacgatggtgatggacctgatgagcctcac
atggaagacagcaacgtcagttacggcagctatgaggagacagagagccgcagtcagatg
cagccttctagcatgggaaatggagaagaatacggcatcagtgaggaggaggaggaagat
gaagaagatgaagcacggaggagaggaccagctgtgctctcccaggtccaactaagtgaa
gacgaggagagcgaagagttcagatctatcgggggagacagcgacatggactctgacaac
tag
DBGET
integrated database retrieval system
