Seriola lalandi dorsalis (Yellowtail amberjack): 111654056
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Entry
111654056 CDS
T06058
Symbol
nectin1
Name
(RefSeq) nectin-1 isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03266
Virion - Herpesvirus
slal04514
Cell adhesion molecule (CAM) interaction
slal04517
IgSF CAM signaling
slal04520
Adherens junction
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
111654056 (nectin1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
111654056 (nectin1)
04517 IgSF CAM signaling
111654056 (nectin1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111654056 (nectin1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111654056 (nectin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111654056 (nectin1)
04090 CD molecules [BR:
slal04090
]
111654056 (nectin1)
Cell adhesion molecules [BR:
slal04515
]
Immunoglobulin superfamily
Nectin family
111654056 (nectin1)
CD molecules [BR:
slal04090
]
Proteins
111654056 (nectin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
ig
I-set
Ig_PVRIG
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
111654056
NCBI-ProteinID:
XP_023260679
Ensembl:
ENSSLDG00000019073
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MAMCVGIWILLLALHIQAGNGQMVQMDPSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
LLNGTKQNVAIANPALGVSVLQPFKERVSFKQAAVRHRTPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRMTLTTPTIVARPQKRKMTVATCVSANGKPPSVI
KWDTRLKGEATFQETRNQNGTVTVRSNYVVVPSRETHKQRLTCIVTYRNEKITDSVVLNV
QYEPDVKIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSLPSNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGIVDVNITEKPLPQGPPGGVIGILGGVVAIGLIVGVA
VTVFMVHRRQQKTRTETDNDLIAVAAVADSCVTQAPEKPESPTRTDLPPAHKPAPPPPKK
KNSDMKGHLTSDDIQVVHLDKEEEMQKLPLQPPYYDMAPSESTPFTDKPDSGRRPEELLN
PAEYMSYQRICNMEHFPESQPAPAYPPVTFLPQHPYAQQPSNEPMYSNTSFSAPGPRAPF
TFPKEQSV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtgtgtgggtatatggatactcctgttggcgctgcacatccaagctggcaac
ggacagatggtacagatggaccccagtaagtctggctttgtgggttcgcaagtggagctg
cgctgcattttcatcaacagtaacccaccagtcaagatctctcaagtcacctggcagaag
ctgctcaacggcaccaaacagaacgtggccatagccaacccggccctcggcgtgtcagtc
ctgcagcccttcaaggagcgggtcagcttcaagcaggctgcggttcgtcatcgcacgccc
tcgctggaggacaccaccatcgtgttctctaacctgcagctgtctgacgaagctgcctac
atctgcgagtataccacatttcctgcgggcaaccgagagaacatggtcaacctcactgta
tttgctcggcccatgacacgtatgaccttgacgacgcccacgattgtggccaggcctcag
aaacgcaagatgaccgtcgccacttgtgtatcggccaatggcaagcccccgagtgtgatc
aaatgggacaccaggttgaagggcgaggccactttccaggagacccgcaaccaaaatggg
acggtgacggtacggagcaactacgtggtggtgcccagccgcgagacccacaaacagagg
ctcacgtgtatcgtgacgtaccgaaatgagaagatcacggacagcgtggtgctcaatgtg
cagtatgaacctgacgtgaagatcgagggcttcgatgggaactggtacttgaaccgtcag
aatgttcagctgacctgcagggccgatgccaacccccctgtcacaatctaccagtggaaa
ctcttgaacggctccctgcccagtaatgtggagatcaagaacaacaccctgttcttcaag
gggccggtgacctacgacttggccggcacgtacgtctgcgacgctaccaacggcatcggg
actcgcactggcatcgtggacgtcaacatcacagagaagccactgccacagggtccccca
ggtggtgttattgggatccttggaggtgtcgttgccatcggactcatcgttggtgtggct
gttactgttttcatggtccatcggcggcagcagaagacccgcactgagacagataatgac
ctcattgctgttgctgctgttgctgatagttgtgtgacacaggctccagagaagccagag
tcccccacaaggaccgacctcccacccgcccacaaaccagcccctcccccgcccaaaaag
aagaacagtgacatgaagggacacttgacgtccgatgacatccaggtggttcatctcgac
aaggaggaggaaatgcagaagcttcctcttcagcctccttattacgacatggcgccctct
gagtcgacccccttcactgataagccggactctgggaggcgtccagaggagttgttgaac
ccggctgaatacatgagctaccagcgcatctgcaacatggaacactttcccgagtctcag
cccgctccagcctacccccctgttactttcttgcctcagcacccctacgcgcagcaacca
tccaacgagcccatgtactccaacacgagcttctccgcccccggccctcgggctccgttc
actttccccaaggagcaatccgtgtga
DBGET
integrated database retrieval system
