Seriola lalandi dorsalis (Yellowtail amberjack): 111654088
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Entry
111654088 CDS
T06058
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04145
Phagosome
slal04148
Efferocytosis
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04810
Regulation of actin cytoskeleton
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111654088 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111654088 (itgb5)
04148 Efferocytosis
111654088 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
111654088 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111654088 (itgb5)
04810 Regulation of actin cytoskeleton
111654088 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111654088 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
slal04515
]
111654088 (itgb5)
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
111654088 (itgb5)
Cell adhesion molecules [BR:
slal04515
]
Integrins
Integrin beta subunits
111654088 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
111654088
NCBI-ProteinID:
XP_023260731
Ensembl:
ENSSLDG00000019573
UniProt:
A0A3B4YB07
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MWSPGTWMWRAALCCVLLETLTHTATGLNMCMSGSATSCEECLLIHASCAWCAQEDFGRG
RTLKSRCDFSHNLLRRGCEVRFIEYPTSTISILQNMPLSSKGTGASQYDAVQIMPQKISL
SLRPGDQTWFGVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAQEMGKLTSNFR
LGFGSFVDKNISPFSYTAPKYQENPCSGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKDEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPH
DGQCHLNDNNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNVIQLIINAYNNIRSKVELTVWDHPEDISLSFTATCQDGKPLPGLRKCADL
KIGDTVSFNVSVEARSCPPRGADQSFTIKPVGFKDRLEVAVDYQCDCGCSRTAQTNSSIC
SSIGTYHCGTCHCEPGYLGARCECQEGEASSMYLSACRETEGKQICSGRGECSCNQCLCY
ESEFGKIYGSFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETSSCVS
DDGQMCSGRGSCVCSRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGQLADNQ
TCQRLCKDEIITVETLKTDDPGAVLCLYKTDNDCVMKFTYSEHASGQSVLTALKEPECGG
GPDAMTVLLAVVGSILLVGVVLLAVWKLVITIHDRREFARFQSARSRARYEMASNPLYKQ
PVSTHFVETDFNMYGKSYNGGVH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggacgtggatgtggcgagcggctctgtgctgcgtgcttctggaaaca
ttaacgcacaccgccacaggtctcaacatgtgcatgagtggcagcgcgacgtcctgtgaa
gaatgtctcctcattcacgccagttgtgcctggtgcgcacaggaggattttgggaggggg
cggactctgaagtcacggtgcgatttcagtcacaacctgctgaggaggggctgcgaggtt
cggttcatcgagtaccccaccagcaccatctccatcctgcagaacatgcccctgagttct
aaagggaccggggcgagccagtacgatgccgtccagattatgcctcagaaaatctccctc
agcttgcggccgggagaccagacgtggttcggagtgcaggtgcggcaggtggaggactac
ccggtggatctctactacctgatggacctgtctctttccatgaaagacgacctggacacc
atccgtaacctgggcaccaagttggcccaggagatgggaaagctcaccagcaacttcagg
ctgggcttcggctcctttgtggacaaaaacatttcccccttctcctacacagcgcccaag
tatcaggagaatccatgcagtggatacaaactgttccccaactgcgtccccaccttcggt
ttccgccacatcctctcgctgacggacaaagtggaccgctttaacgaggaggtgcagaag
cagatggtatctcgcaaccgggacgcaccagagggcgggttcgacgccatcctgcaggca
gctgtttgtaaggatgaaataggctggaggaaggaggcctaccacctgctggtgttcgcc
accgacgacgtgcctcacctggctctggacggccggctgggcggcctcgtccagccccac
gacggacagtgtcacctcaatgacaacaacgagtacagcgcctccacgaagatggactat
ccttctctggctctcctgggggagaaactggcagaaaataacatctttctcatcttcgcc
gtcacaaaacgcctttacgtcatttataagaacttcactgcgctcatacctgggactaca
gttgaaatcctggatcaggactccaagaacgtgattcagctcatcatcaacgcctacaat
aacatccgctctaaagtggagctgacagtgtgggaccacccagaggacatcagtctttcc
ttcaccgccacctgccaggacgggaaaccgctgccaggcctcaggaagtgtgccgaccta
aagataggagacacggtttcgttcaacgtgagcgtggaggcgcggagctgtcccccccgc
ggcgccgaccagagcttcaccatcaagccggtggggttcaaagaccgtctggaggtggcg
gtggattatcagtgtgactgcggctgcagccggacggcgcagaccaacagcagcatctgc
agctccataggtacctatcactgcggcacgtgtcactgcgagccgggctacctgggcgcc
cgctgcgagtgccaggagggcgaggccagcagcatgtacctcagcgcctgccgggaaacc
gagggcaagcagatctgcagcgggcggggagagtgcagctgcaaccagtgtctgtgctac
gaatcggagttcgggaagatctacggcagcttctgcgagtgcgacgacttctcctgcgcc
cgacacaaaggcatcctctgctcaggtcacggagagtgtcactgcggggagtgtaagtgt
cacgccggttacatcggcgacaactgcaactgctccacagagacgtcgtcctgcgtttcc
gatgacggccagatgtgcagcgggcgcggcagctgcgtgtgcagccgatgtcagtgcacc
gagccgggggccttcggagatacctgtgaaaaatgccccacctgccccgatgcctgtggc
actaaacgggagtgtatcgagtgccggctcttcaactcgggacaacttgcagacaaccag
acttgccagcgcctgtgcaaggatgaaatcatcactgtggagaccctcaaaactgacgac
cccggcgccgtgctctgtctgtacaagacggacaacgactgcgtcatgaaattcacgtac
tcggagcacgccagcggacagtccgtcctcactgctcttaaagagccagagtgtggcggt
gggcctgacgccatgacggtgctgctggccgtggtcggcagcatcctgctggtgggagtc
gtgctgctcgctgtgtggaagttggtcatcaccattcatgaccggcgagagttcgcacgc
ttccagagcgcacgctcacgtgcccgatacgagatggcctccaaccctctgtacaagcag
ccggtctctacgcacttcgtagaaacagatttcaacatgtacgggaagtcctacaacggg
ggggtccactga
DBGET
integrated database retrieval system
