Seriola lalandi dorsalis (Yellowtail amberjack): 111654456
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Entry
111654456 CDS
T06058
Symbol
tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111654456 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111654456 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111654456 (tnr)
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111654456 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Pur_ac_phosph_N
EGF_2
EGF_Tenascin
Interfer-bind
DUF4998
NDNF
Motif
Other DBs
NCBI-GeneID:
111654456
NCBI-ProteinID:
XP_023261251
Ensembl:
ENSSLDG00000012696
LinkDB
All DBs
Position
Unknown
AA seq
1378 aa
AA seq
DB search
MPLAQQHYRATVPITGWILVLALFLALQGAAHAAPSGDNKLVRTTRVRRQTPGGDQPTSS
ANQTLREQPVVFNHVYNINVPLESLCSVDLDASAPPAPGEGSRAELGSGPSVEGPMDPNG
PTEYSEQTLDADSQVTFTHRINIPKAACGCTATTTIQQLATRVEMLEREVSMLRAQCGSG
CCGESSAMGRLDFVPGCSGHGSFSFDLCGCICEEGWTGKNCSEPRCPDDCSGQGVCVEGE
CVCDRDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLCVN
GTCQCRPGYVGEDCSLVYCANNCSKKGICKEGFCVCQDGFAGDDCNSVAPVMNLMVRGVT
DRTVDLEWEGSIVLTDFLVTYTPSSPGGVQLEIRIPGNTTTCTISGLEAGMEYNINVFAV
INNSISVPDSITVWTYLSNPDGLVFKSITETSVEVQWQPFYYSFDGWEISFIPKDNDGGM
TAQLPSTITSFVQTGLRPGEEYTVNLVALRDQGRSQPVTATVTTLIDGPTQLIVRDVSDT
VAFVEWTPPKAKIDQIVLRYGLVGGEGPRTTFRLQPTLSQYSLQVLRPGSRYEVSVRGVR
KGNESGSISTEFTTEIDAPKNLRLVSKTSTTLELEWDNSEAEVEGYQVVYSTLAGDQYDK
VIVPRNEGATTKTTLTDLLPGTEYGIGISAMKDSNQSTPATMNARTSLDVPMDLTVTAST
DNTITLVWGVVQGPIDHYKVTYTSSSGVTTELTVPKDVTTTSLTDLEPGTEYTITVAARR
GRQQSTAATIDAFTGIRPVTHLYLSEVTSDSVSVAWSAPAPPADLFILSYSSSDGTDTSK
VTLDGSKTRSLVQGLLPSTQYTISLITIQGDVTSEPITASLTTGMDPPKEMMVSDVSEDA
VTISWIKPLAPFEYYKLSYQSARGRVDSVVIDSDVTNYTLSSLFPATEYEISLNAVRGSQ
ESKVVTTSVFTAMDMPAELTALNITPQGALLRWNPPLSSVDNYVLTLTHNQVTADTFLVE
GNKQEHQLSNLKPSTTYSVALYATKGPLTSGTVITNLQTPMDAPLNLTASEVNHRSALIS
WQPPIAEIDNYMLTYKSTDGSRKELILDAEDTWIRLEGLAETTEYTVKLQAARGLDTSAV
VSTTFTTGSRLFATPQNCAQHLLNGETLSSVYTIYINRDPSQGVQVYCDMTTDEGGWIVF
QRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNVQKIAAQGRYELRIDMRDGQESVYAN
YDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAWWY
KNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKRRRSAPV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgccactggcacagcaacactacagggccactgtgcccataacaggctggatcctggtt
ttggctctgtttcttgctctacagggtgccgctcatgctgctccatcaggagacaacaag
ctggttcgtaccaccagagtgaggagacagaccccagggggggatcagcccacttcctca
gccaaccagaccctgcgcgagcagcccgtggtctttaatcatgtctacaacatcaatgtt
cccttggagtctctgtgctctgttgacctggacgcctccgcaccacctgcaccaggtgaa
ggttcacgtgctgagctggggtccggaccctctgtggagggtccaatggatccaaatgga
ccaacagaatactctgagcagacactggatgctgacagccaggtcacatttacccaccgc
atcaatatcccaaaagctgcatgtggttgtacagcaacgaccacaatccagcagctcgcc
accagggtggagatgctggagagagaagtttccatgctcagagctcagtgtggatctggg
tgctgtggggagagctcagccatgggtcgtttggactttgtcccaggctgcagtggccat
ggcagcttcagctttgacctttgtggctgcatctgtgaggaaggttggaccggcaagaac
tgctccgagcctcgctgcccggacgactgctccggccagggggtgtgcgttgaaggggag
tgtgtgtgcgaccgtgactttggaggcgacaactgttcagagccgcggtgcccttcggac
tgctcgggccgagggttgtgtatagacggagagtgtgtgtgcgaggagtccttcactggc
gaggactgcatggtcgggaggtgtctcaatgactgctcggaccaggggctgtgtgtcaac
gggacgtgccagtgccggcccgggtatgtgggagaggactgctcgctggtgtactgtgcc
aacaactgcagcaagaagggaatctgcaaggaaggtttctgtgtctgccaggatggcttt
gctggagatgactgcaactctgtggcacctgtcatgaacttgatggtccgaggggtgact
gatcgcactgttgacctggagtgggagggctcaattgtgctgacagatttcttggtgacc
tacacaccaagcagccccggaggtgtgcaattagagataaggattccaggcaataccact
acctgcactatctcaggcctggaagctggcatggagtacaacatcaatgtgtttgctgtc
attaacaacagtatcagcgtccctgacagcattactgtttggacctatctctccaatccg
gatggtttagttttcaaatccatcacagagacgtcagtggaggtccagtggcaacctttc
tactattccttcgatggatgggagatcagcttcatccctaaggacaatgatggagggatg
actgcacagctacccagcaccatcacttcctttgtgcagactggtctgagaccaggggaa
gagtatactgtcaacttggtggcgctccgagaccagggtcgaagtcagccagtcaccgct
actgtcacaacattgattgatggccccactcagctgatcgtgcgcgatgtgtcagacact
gtggcgttcgtggagtggacgccaccgaaagcaaagatcgatcagatcgtgttgcgttac
ggcctcgtgggaggtgaggggccgcggaccaccttccgtctccagcccacactcagccag
tattccctgcaggttctgcgtccgggctcgcgttacgaggtgtctgtcagaggtgtgagg
aaaggaaacgagagtggatccatttccactgaatttactactgagatcgacgcccccaag
aacctgcggctcgtgtccaagacgtccaccaccctggaacttgaatgggataacagtgag
gctgaggtggagggctaccaagtggtgtacagcactttagcaggagatcagtatgataaa
gtcattgtaccgcgaaatgagggagccaccacgaagaccactctcacagacctgctgcca
ggcacggagtacggcatcggcatctctgccatgaaagacagcaaccagagtacaccggca
acaatgaacgccaggaccagtctggatgtgcccatggatttaacagtgacagcctccaca
gacaacaccatcactctggtgtggggcgtggtacagggtcccatcgaccactacaaggtc
acctacacatcttcctctggcgtcactactgagctgacagtgcctaaagatgtaacaacc
acctcactgacagaccttgagcccgggactgagtacactatcactgtagcagcaagaaga
ggaagacagcagagcactgcagctaccatagacgccttcacaggaatcagacccgtaacc
cacctctacttgtcagaggtgacttcagattcagtttcggtggcgtggagtgccccagca
ccgcccgctgacctcttcatcctgagctacagctcttccgacgggaccgacacctctaag
gtgacgctggacggctccaagacgaggtcactggtccaggggctgctgccgtccactcag
tacaccatcagtctaatcacaattcagggggatgttacctctgagcctattacagcatca
ctcactacaggcatggacccaccaaaagagatgatggtgtcagatgtgtctgaggacgca
gtgactatctcttggatcaaaccactggctccatttgaatactataagctgtcttaccag
tcagccagaggtcgagtggacagcgtggtgattgacagcgatgtgaccaactacaccttg
tccagtctgtttcctgctacagaatacgagatcagtctcaatgctgtcagagggagtcag
gagagcaaagtggtcaccacctccgtcttcacagcgatggacatgccagctgaattgacg
gccctcaatatcaccccgcaaggagccctgctgaggtggaatcctccactgtccagtgtc
gacaactatgtgctgaccctcacacacaatcaggtcacagctgatacattcctcgtggaa
ggcaacaaacaggagcaccagctgtcaaaccttaagccaagcaccacctactctgtggcc
ctctacgccaccaaaggacccctcaccagtggcacggtcatcaccaacctccaaacaccc
atggacgcacccttgaacctgacagccagtgaagtgaatcaccgcagcgctctcatctcc
tggcagccgccaatcgcagaaatcgacaactacatgctcacctacaagtcaacagacggc
agccgtaaagagctgatcctagatgcagaggacacttggattcgactggagggactggct
gagaccacagagtacactgtcaagctccaggcagcaaggggacttgacaccagtgccgta
gtctccactaccttcactacagggagtcgtctatttgcaacacctcagaattgtgcccaa
cacctgctgaatggagagacgctgagcagcgtctacaccatttacatcaacagagacccc
agccagggagtgcaggtgtactgtgacatgaccactgatgagggaggctggattgtgttc
cagcgtcgtcagaacggccttacagacttttccaggaagtggagtgactatcgggttggc
tttggaaacctggaggatgagttctggcttggtctagacaacgttcagaagattgctgct
cagggccgctatgagctgaggattgacatgagggatggacaggagtctgtctatgccaat
tatgacaaattctctattggcgacgcgagaaatctctacaagctcaggataggagagtac
aatggcaccgctggtgactctctgagctaccaccagggccgacccttctctacaaaagac
agagacaatgacattgctgtcactaactgtgccttgtcctacaaaggagcctggtggtac
aagaactgccaccgggccaacctcaacggcaaatacggcgaatccagacacagtcagggt
attaactggtaccactggaaaggccacgagttctctattccctttgtggagatgaagatg
aggccgttcaacttccgtagcatcagcagcaagaggaggcggtctgcccctgtataa
DBGET
integrated database retrieval system
