Seriola lalandi dorsalis (Yellowtail amberjack): 111654494
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Entry
111654494 CDS
T06058
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111654494 (sox6)
Transcription factors [BR:
slal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111654494 (sox6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111654494
NCBI-ProteinID:
XP_023261305
Ensembl:
ENSSLDG00000015372
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MEGFLRSSFLLSRVMSSKQATSPFASVVDGDDAMSQEHLSWEKEDSAEAHGTPQLPLHSL
LHGKAHPDEMQPLSSVPPESDWDSLVSAQQRMESDSNKVCSLYSFRNNSTSPHKPEEGAR
ERSDLLSGSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDESSCMEKLLSKDWKEKME
RLNTSELLAEVKGTPESLAEKEHQLSTMITQLISLREQLLAAHDEQKKLAASQMEKQRQQ
MELARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQ
QGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPP
LPQPLNASGPISPSSLKNDKSSSSPITQVKEEGTQPLNLSARPKTTELVKSPTSPTQNLF
PGSKNSPNSLIGKGGIPSPLGGGLGRGSSLDILSSLNSTALFGDQDTVMKAIQEARKMRE
QIQREQLQHHQQGMEAKLSALSSVGLNNCRVDKERAHFESIGHHLGKLGEEGKIGHRVID
LTRPEDLDGSKEVNGSADKPQPYYCWPTGGAGSTEARVFRESRGRNNNEPHIKRPMNAFM
VWAKDERRKILQAFPDMHNSNISKILGSRWKAMSNQDKQPYYEEQARLSKLHLEKYPNYK
YKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQPPQIPITTSASMVYPGAITM
ATTTPSPQMTSECSSASASPEPSIPVIQSTYNMKLEPNTMANNSEPVNGEDEMDMYEDFE
DEPKSDYSSENDTQEPVSAN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggagggctttctacgtagcagctttttactgagcagagtcatgtcttccaagcaagcc
acgtctcctttcgcctccgtggttgatggggatgatgccatgagtcaggagcacttgtct
tgggagaaagaggacagtgccgaggcccatggcacaccacagctgcccctgcacagtctg
ctgcacggaaaagcccatcccgatgaaatgcagccgctcagcagcgtaccgccagagagc
gactgggacagcttggtgtcagcccaacagcgtatggaatctgacagcaataaagtatgt
tccctgtactccttccggaacaattctacttccccacacaagccggaggagggggcccgg
gagcgaagcgacctgctgagcggatcagcgtttggaactccggagcgccgcaaaggaagc
ctggcagatgtagtggacacgctgaagcagaagaagttggaggagatgacaaagacagag
caagacgaatcctcatgcatggagaaacttctctctaaagactggaaagaaaagatggag
aggctcaacaccagtgaacttttggcagaagtaaaagggactccagagagcctggcagaa
aaggaacaccagctctccacaatgatcacccagctgatcagcctgcgagagcagcttctg
gctgcccacgacgaacagaagaaactcgccgcctcacagatggagaaacagaggcagcaa
atggagttagctcgtcagcagcaggagcagattgcaagacaacagcagcagcttctgcag
cagcagcacaaaatcaacctcctccagcagcagatccaggtccagggtcacatgcctccg
ctcatgatccccatttttccacacgaccaacgcactctggcagcagccgccgccgcccag
caaggctttctcttccctccgggaatgtcttataagccaggtgataactacccggtgcag
ttcattccatccacaatggcagctgcagcagcgtcaggactcagcccccttcagcttcag
caactgtatgccgcccagcttgccagcatgcaggtctctcctggagccaagatgcctcca
ctcccccagcccctcaatgcaagtgggcccatttctccctcctctctgaagaatgacaag
agttcctccagccccatcactcaagtcaaggaggaaggaacacagccgctcaacctgtct
gctcggccaaagacgacagaactggtcaaatcccccacatccccgacacaaaacctgttc
cctggcagtaaaaacagccctaacagtctcatcggcaagggtggtatccccagcccactc
ggaggaggcctgggacggggctcatctctggatattctgtcaagcctaaactctaccgcg
ctgttcggggaccaggacacagtgatgaaggccatccaggaggctcggaaaatgagggag
cagatccagagggaacagctgcaacatcaccagcagggcatggaggccaagctgtccgcc
ctcagttcagtgggcctcaacaactgcagagttgacaaggagagggcgcattttgagagc
attgggcaccacctcggcaagctgggtgaggaagggaagatcggccacagagttattgac
ctcaccaggccagaggatctagatgggtccaaggaagtcaatggctctgcagataaaccc
caaccctattattgttggccaacaggaggcgctggatctactgaggcccgagtcttcagg
gaatctcgaggaaggaacaacaacgaaccccacattaaaaggccgatgaatgcattcatg
gtgtgggccaaggatgagcggcgcaagatcctccaggcctttcccgacatgcacaactcc
aacataagcaagattttgggttctcggtggaaggccatgtctaaccaggacaagcagcca
tactatgaggagcaggcccgtctgagtaagctccacctagagaagtacccaaactacaag
tacaagccgcggcctaagaggacctgcattattgacggaaaaaaactccgcattggagag
tacaagcagatgatgcgctcacggcgacaagagatgaggcagttcttcactgtgggacag
ccaccacagattcccatcactaccagcgccagtatggtctatcccggggccatcaccatg
gcgaccaccacaccctcacctcagatgacatcagagtgctcgagtgcctcagcaagtcct
gagccatccattcctgtcattcagagcacctacaacatgaagctagagcccaatacaatg
gcaaacaacagcgagccggtcaatggtgaggatgagatggacatgtacgaggattttgag
gacgagcccaaatcagactatagcagtgaaaatgacacacaagagccagtcagcgccaac
tga
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