KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111654736
Entry
111654736         CDS       T06058                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111654736 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slal03400]
    111654736 (xrcc1)
DNA repair and recombination proteins [BR:slal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     111654736 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 111654736
NCBI-ProteinID: XP_023261632
Ensembl: ENSSLDG00000022112
LinkDB
Position
Unknown
AA seq 629 aa
MPEIKIKHVVSCSTEDTTHKADNLLSSDTYRKWKAARPGEKQTSVILQVCFCNSTPTCVV
SWGKYFYSGYVLVGNSSAVRDQDYEVLLVMSSFMSPTESRNGTNMNRVRFFGPNQLQKST
AQEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKDDPPSTASPKLTKLGQFKMKDESPS
SGPSLQPGSLFFSRDSATKSSPSLKVSPQSEKLSYAAAALQAGGTTHSPGQASSSTSASP
QPPAKRKFEFSKERQSVPGPPPSKKISPTGSPEGKAATPKHKPSPASTPSPSAAKASLAQ
KSADKKRESQSKSEPKPKQQKAKSEGAQQVPFNRIMEGVVFVLSGFQNPFRGELREKALD
MGAKYRPDWTPDCTHLICAFANTPKYSQVKSAGGIIVRKEWVMDCHKRKQKISYKQYLMD
GAESSSESEMEVDDQSEEEMNAKTPQKQERQIAPKKTLEKRNEDEDEYAGSTDVDEPGGD
DESAVDTEDELQRVENENRQKKAAAEVKMVKEEDPYGGSTDENTDAEAEEDHPIPDLPDF
LSGKHFFLYGKFPNNERRLMLRYIIAFNGVIEDYMTEKVQFVVTSEGWHDSFEDALMENG
NLNFVKPAWIYAINERQKMLPYQPYSVVP
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgcctgagatcaagatcaagcacgtcgtgtcttgcagcaccgaggacactactcacaag
gcagacaacctgctgagctctgatacctacagaaagtggaaagcggcaagacccggggag
aagcagacatcagttatcctgcaggtatgtttttgcaactctactcccacatgtgttgtt
agctggggaaaatatttttattcagggtatgtgttagttgggaattcctcagctgtcaga
gaccaggactatgaggttcttctggtcatgtcttccttcatgtccccgacggagagccgc
aatggcaccaacatgaaccgtgtgcgtttctttgggcccaaccagttgcagaagagcaca
gcacaggagaagtgggacagagtgaaaattgtgtgtagccagccatacagcaagaacata
gcatacggactggcctttgttaagttccactcaccacctgacaaagatgatcctccttca
acagcttctccaaaactgacaaagctgggacagttcaagatgaaggatgagtctccttca
tctgggcccagccttcaacctggcagtctcttcttcagtcgagacagtgcaacaaaatcc
agtccttcactcaaagtgtctccccagagtgagaagttgagttatgctgccgctgccctg
caggctggtggcaccacccactcgccaggccaagcttcctcctccacctctgcctcacca
cagccaccagcaaaaagaaaatttgagttcagcaaagagcggcagtctgtccctggcccc
cctccttcgaagaaaataagccccacgggctcacccgagggcaaagctgcgacccccaaa
cacaagccgagcccagccagcacgcccagccccagtgctgcgaaagcttccctggcacag
aagtctgctgacaagaagagggagagtcaatccaaatccgaacctaaacccaaacaacag
aaggcaaaatccgagggagcgcagcaggtcccattcaaccggatcatggagggggtggtg
tttgtcctcagtggcttccaaaatccattcagaggggagctgagggaaaaggctctggat
atgggagccaagtaccggcctgactggacacccgactgcacacaccttatctgtgccttc
gctaacacccccaagtacagccaggtgaaatcagcagggggcatcatcgtacggaaggaa
tgggtgatggactgccacaagcggaaacagaagatctcctataaacagtatttgatggat
ggagcggagtcaagctcagagagcgaaatggaagtggatgaccagagtgaagaggaaatg
aacgcaaaaactccacagaagcaggagagacaaatcgctcccaaaaagacgctagagaag
aggaacgaagatgaagatgaatatgctggctccactgatgtggatgaaccaggaggtgat
gatgaatctgccgtggacacagaggacgagctccagagagtggagaatgagaacagacag
aagaaagcagcagcagaagtgaagatggtgaaagaggaggatccgtacggggggtcgaca
gatgaaaacacagacgctgaggctgaagaggatcatcccatcccggacctaccagacttc
ctgagcggaaagcactttttcctctacggcaaatttcctaacaacgagagacgcctaatg
ttgcgatacattattgcctttaatggagtgatcgaggactacatgacagagaaagtgcag
tttgtggtgaccagtgaggggtggcatgactcttttgaagacgcactgatggagaacggc
aatctgaactttgtcaaacccgcatggatttacgcaatcaatgaacgacaaaagatgctg
ccctatcaaccctactctgttgtcccctga

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