Seriola lalandi dorsalis (Yellowtail amberjack): 111655208
Help
Entry
111655208 CDS
T06058
Name
(RefSeq) neurexin-1a-like isoform X1
KO
K07377
neurexin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111655208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111655208
Membrane trafficking [BR:
slal04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
111655208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
111655208
NCBI-ProteinID:
XP_023262278
Ensembl:
ENSSLDG00000018042
LinkDB
All DBs
Position
Unknown
AA seq
1493 aa
AA seq
DB search
MSVMAVCVWVAAPLLFLGLCLCSVGGQAQGEVLEFGGVSSQWGRFPVWNACCESVLSFSL
RTHSQEGLLLYLDDEGFCDFLELLLLHGHLRLRFSIFCADPAELQSGVAVSDGRWHAVRV
KRDWRNTSLEVDGRLEGWAEVKSKRRDMTVFSHTFMGGLTPELHSSPLRLTSTSVREHPA
FRGWITAVSINGSMVTLNGSEGVTVTSGCGPDHQCQNGGVCSMVNDQAVCDCSDTGYQGN
DCSEEHSYTPGLAHLMIGDQAREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGC
LKEVVYKNNDVRLELSRLAKQGDPKMKVSGVVSFKCESVATLDPVTFDTPESYVALSKWT
AKKAGSISFDFRTTEPNGLMLFSHGKPRQQQRKDPRTPPTVKVDFFAIEMLDGHLYLLLD
MGSGTTKTKAIDRKVNDGEWYHVDFQRDGRSGTISVNSVRTAYTAPGDSEILDLDDTLYL
GGLPEDRAGLIFPTEVWTALLNYGYVGCIRDLFVDGQSKDIRRLAEAQRAVGVKPSCSRE
PPKQCLSNPCQHTGICREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKVQLPVAM
HTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTASKGP
ETIFAGSGLNDNEWHTVRVVRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNVETGIVTEK
RFIPAVPSNFIGHLQGLTLNGMPYIDLCKNGDIDYCELNAVIGYKSIVADPVTFRSRSSF
VTLPTLQAYYSMHLFMQFKTTSPDGLILYNRGDGNDFIVIELVKGYLHYISDLGNGAHLI
KGNSNSPLNDNHWHNVHISRDTNNLHTVKIDTKVTTQTTMGAKNLDLKGDLYIGGVSKEM
YRDLPKLVHSREGFQGCLATVDLNGRLPDLLADALATMGQVERGCEVTLMKADLQGPSTT
CQEDSCSNQGVCLQQWEGFTCDCSMTSYAGPLCNDAGTTYIFGRDGGMVVYTWPPNERPS
TRADRLALGFSTQQKHAILLRVDSASGLGDYLQLQIDKGNIRVVFNVGTDDINIEESSKF
VNDGKYHIIRFTRSGGNATLQLDDLPVIERYPSGNIDNERLAIARQRIPYRLGRVVDDWL
LDKGRQLTIFNSQTTVRVGGGERGGGMFQGQLSGLYYNGLRILNMAAEGHPHIRVEGSAR
LVGDMPSSSITPQSSAAAGGNRSDSAPSISDITTTTATNRKQGATQQSADDLLVASAECP
SDDEDIDPCDPSSARPPLPEVKVFTGPSEVVRESSSTTGMVVGIVAAAALCILILLYAMY
KYRNRDEGSYHVDESRNYISNSATQPNGSAKDKPLGIAKISKNKKNKDKEYYV
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgatggcggtgtgtgtttgggtggcagcccccctgctattcctgggactgtgc
ctgtgcagcgtggggggccaggcccaaggagaggtcctggagtttggaggcgtgtccagc
cagtgggggcggttcccagtgtggaacgcctgctgtgagagtgtgctgagcttcagcctg
cggactcacagccaggagggcctgctgctctatctggatgatgagggcttctgcgacttc
ctggagctgctgcttctccatggccacctccgcttgcgtttctccatcttctgtgctgat
ccggccgagctgcagtcaggtgtggctgtgagtgatggccgttggcacgcagtgcgtgtc
aagagggactggaggaacacctcgttggaggtggatgggcggctggagggatgggcagaa
gtaaagagcaagagaagagacatgacagtattcagccacaccttcatgggcgggttgacg
ccagagcttcactcctcgccattacgcctcacctccacttcggtgcgggaacaccccgcc
ttccgtggctggatcacggcggtgagcatcaatggctcaatggtgacgctgaatggctca
gagggcgtcacagtaacatctggctgtgggccggaccaccagtgccagaatggaggggtg
tgcagcatggtcaacgaccaggccgtctgtgactgctccgacaccggttaccaaggcaac
gactgcagcgaagagcacagctacactccaggtctggcacacctgatgattggcgaccaa
gctcgtgaggagtacgttgccaccttcaagggctctgagtacttctgctatgacctgtcg
cccaaccccatccagtcaagcagcgatgaaatcacactctccttcaagacactgcagcgc
aacggcctgatgctgcacaccggcaagtcagccgactatgtcaacctggcactgaagaac
ggtgccgtgtcacttgtcatcaacctcggctctggggcctttgaggccttggtggagcct
gtcaacggcaagttcaacgacaacgcctggcacgacgtcaaggtcacccgcaacctgaga
cagcactcaggcattggacacgctatggtgaccatctctgtggacggcatcctgaccacc
acgggctacacccaggaggactacaccatgctgggctctgatgacttcttctacgtgggg
gggagccccagcaccgctgacctgcccggttctccagtcagcaataacttcatgggctgt
ctcaaagaggtggtgtacaagaataatgatgtacggttggagctgtctagactggctaaa
cagggagacccaaagatgaaggtaagtggggtggtgtccttcaagtgtgagagtgtggcc
acgctggaccccgtgacctttgacaccccagagtcttacgtggcactgagcaaatggaca
gcgaagaaggcaggatccatctcgttcgacttcaggaccacagagcccaatgggttaatg
cttttcagccatggcaaaccccgacagcagcaacgcaaggacccacgcacacctcccaca
gtcaaggtggatttctttgccattgaaatgcttgatggacacctgtacctgctgcttgac
atgggctcaggaaccaccaagaccaaggccatcgataggaaggtcaacgatggagaatgg
tatcatgtggactttcagagggatggacgttcaggaaccatctctgtgaacagcgtaaga
acagcgtacacggctccaggagacagcgagatcctggacctggatgacaccttgtacctc
ggaggactacctgaggaccgtgctggattgatcttccctacagaggtgtggacagcgctg
ttgaactacggttacgtgggctgcatcagagacttatttgtggacgggcagagcaaagac
atccggcggctggctgaggcccagagggcagtgggggtgaagccatcgtgctccagagag
ccacccaaacaatgtctgtccaacccctgccagcacaccggcatctgcagggagggctgg
aaccgctacgtctgtgactgctctgggacgggctacctgggacgttcctgtgagagagat
gcgactatcctgtcttacgacggcagcaagtttatgaaggtgcagttgcctgtggcgatg
cacactgaggcagaggacgtctcgctacgctttcgctcccagcgggcgtatggcgttctc
atggcaaccacatcccgtaactccgcagacacccttcgtctggagctggatgggggccgt
gtccgactaactgtcaacctagactgtatcaggataaactgtacagccagtaaaggccca
gagaccatctttgcggggtcgggcctaaatgataatgagtggcacacggtgagggtagtc
cggcgtggcaagagcctcaaactcaccgtggatgacctgcagcctgttgaaggtcagatg
gcgggcgaccacacccagttggagttccacaatgtggagacgggtattgtgacggagaag
cgcttcatacctgccgtgccctccaatttcatcggccaccttcagggcctgacgctgaat
ggcatgccctacatcgacctgtgcaagaacggcgacatcgactactgcgagctcaatgct
gttattggctataagagcatcgtagctgaccctgtcaccttccgctcacgctccagtttc
gtcacgctgcccacgctgcaggcctactactccatgcatctcttcatgcagttcaagaca
acatcccccgatggccttattctctacaacaggggagacggcaatgacttcatagtgata
gagctggtgaaaggctacctgcactacatttctgacctgggcaatggggcacacctgatc
aaaggcaactctaacagtcctctaaatgacaaccactggcacaacgtgcacatatcccga
gacactaacaatctccacacggtcaagattgacaccaaagtcaccacgcagaccaccatg
ggcgccaagaacctcgacctaaagggtgatctgtacattgggggtgtttccaaagagatg
taccgagacttgcctaagctggtccactcccgtgagggtttccagggttgcctagcaact
gttgatctgaatggccggctccctgaccttttggctgatgccttggcaaccatgggacaa
gtggagagaggctgtgaagttacattgatgaaagctgacttgcaaggtcccagcactacc
tgtcaggaagactcctgctcaaatcaaggagtttgtttgcagcagtgggagggcttcacc
tgtgactgcagcatgacttcgtatgctgggccactatgcaatgacgctgggaccacttat
atctttgggcgtgacggaggcatggtggtttacacatggccgccgaatgaacgtcccagc
accagggcagaccggctcgcccttgggttcagcacccaacagaaacacgccattctactc
agggtggacagtgcctccggcctgggagactaccttcagctgcagatagacaagggcaac
attagagtagtgtttaatgttggcactgatgacatcaacatcgaggagagctccaagttt
gtcaacgatgggaagtaccacataattcggttcacccgcagcggaggcaatgcgaccctc
caactggacgacctgccggttatagaacgctatccctcaggcaacattgataacgagcgc
ctggccatcgccagacagcgaatcccctatcggctcggtcgagtagttgacgattggcta
ctcgacaaaggtcgccagctgaccatctttaacagccagacgacagtgcgtgttggtgga
ggtgagcgaggtggtggcatgttccagggccagctgtctggactctactacaacggcctc
cgcatcctcaacatggccgctgaggggcacccgcacatcagagtggagggcagtgcacga
ttggtcggtgacatgccgtcctcctccatcaccccgcagtccagtgctgcagctggaggc
aaccgctctgactccgctccctccataagtgacatcacaaccaccacagccaccaaccgg
aagcagggcgccacacagcagtcggcagatgacctgcttgtagcttcagctgagtgtccc
agtgatgatgaagacattgatccctgtgaccccagttcagcccgccctccgttaccggag
gtgaaggtgttcacaggtccatctgaggtggtgcgggagagcagcagcaccacgggcatg
gtggtgggcatcgtggcagccgctgccctctgcatcctcatccttctctatgccatgtac
aagtaccgcaaccgtgatgaaggctcctaccatgtggacgagagccgcaactacatcagc
aactcggccacacagcccaacggcagcgccaaggacaagccgctgggcatcgccaagatc
tccaagaacaagaagaacaaagacaaggagtactacgtctga
DBGET
integrated database retrieval system
