Seriola lalandi dorsalis (Yellowtail amberjack): 111655230
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Entry
111655230 CDS
T06058
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04145
Phagosome
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111655230
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111655230
09144 Cellular community - eukaryotes
04510 Focal adhesion
111655230
09142 Cell motility
04820 Cytoskeleton in muscle cells
111655230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111655230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111655230
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111655230
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Opsonins
111655230
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111655230
Exosomal proteins of colorectal cancer cells
111655230
Exosomal proteins of bladder cancer cells
111655230
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111655230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
111655230
NCBI-ProteinID:
XP_023262324
Ensembl:
ENSSLDG00000018556
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MQGMSPLRGSPWLFICLYAAAVCAGVGGAKVDNVSSEVCRHPCEELVILLTEIQGLRIVT
SNLLEDLERVSRENEEMRITLAELSNSSSINSIGRSRSRGVEVVAVEVVAVVVVAVEVVV
AVVVKVMAVEVVEVVVVAVEVVVPVVVKVMAVEVVAVVVAVEVVVPVVVEVVVPVVVAVE
VVVPVVVEVVAVEVVEVGVVMVLVMEVVVVVAALAAVVASAAAVAAVAAAAAAAAVAAVA
ATGAAVTAVAVAAAVAVAAAVAVAVAAVAAVAVAAAVAVAAAVAVAVAAVAAVAVAAAVA
VAAAVAVAVAAVAAVAVAAAVAVAVAAVEVAAAGGGSGSSGGGSGGGSNSSSGGSGGDGA
DYNDLDRDRDEEVWCVQDGRIYEHGEDWEVDSCTSCNCQDGKVVCQQVSCPPVSCLNPSF
IDGKCCPVCLNNGDGWSPWSEWTHCSVTCGRGGQQRGRSCNGIMPACAGPSLQTRSCMLM
KCERKARADGNWGLWSPWSACTTTCGEGHITRVRLCNNPPPHKGGKGCSGSARETQACNN
TLCPIAGGWTSWNEWSLCSESCGGGLSSRQRECINPVPQNGGKRCAGDAVDYEACNKQPC
PIDTCLLSNPCFPGVQCTSYSDGSWECGHCPLGLHGNGTQCDDENECEVEGVCFTECVNT
DPGYYCLPCPHRYKGTQPYGLGLQAAQETKQVCEPYNPCKDNTHTCHKYAECIYLGLASE
VLFKCVCAVGFAGDGFLCGDDSDLDGWPNYKLTCKQNATYHCQKDNCPTIPNSGQEDLDR
DGLGDACDPDDDNDDIIDERDNCPLVYNPRQYDSDRDGVGDRCDNCPFESNPLQTDTDDN
GEGDACSIDMDGDEVLNDRDNCPLVYNTDQRDTDMDGVGDQCDNCPLLHNPLQLDSDSDL
VGDMCDDNDDIDEDGHQNSLDNCPYIPNSNQADHDNDGRGDACDHDDDNDGIPDDRDNCR
LVPNRDQLDSDGDGSGEACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLLDPQGTT
QSDPLWVIRSQGRELLQTANSDPGIALGYDKFSAVDFSVTFYVNTNRDDDYAGIVFAYQS
TQRFYVVMWKQVSQAYWEKRPSKAFGTAGVSIKLVNSTTGPGQYLRNALWHTGNTRNQVR
TLWHDPNKIGWKDFTAYRMHLIHRPKTGFIRVVVYEGRDILSDSGAVYDHTLAGGRLGLF
VFSQEHVLFSDLRYECRDN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaatgagtccgctgagaggttccccctggctttttatatgcctctatgcagca
gctgtgtgtgcaggtgtgggtggtgcaaaggttgacaatgtgtcgtcagaagtctgtcgt
catccatgtgaggagctggtgattttgctcactgagatccagggcctgcgtattgtgacc
agcaacctgcttgaagacctggagagagtatcaagagaaaatgaagagatgcggatcact
ttggctgagctgagcaacagcagcagtattaacagcatcggcagaagcagaagcagaggt
gtggaggtggtggcagtggaggtggtggcagtggtggtggtggcggtcgaggtggtggtg
gcagtggtggtcaaggtgatggcagtggaggtggtggaggtggtggtggtggcggtcgag
gtggtggtgccagtggtggtcaaggtgatggcagtggaggtggtggcagtggtggtggcg
gtcgaggtggtggtgccagtggtggtcgaggtggtggtgccagtggtggtggcggtcgag
gtggtggtgccagtggtggtcgaggtggtggcagtggaggtggtggaagtgggagtggta
atggtattggtgatggaggtggtggtggtggtggcagcattggcggcagtggtggcatcg
gcagcagcagtggcggcggtggcagcggcggccgcggcagcagcggtggcggcagtggca
gcaacaggggcggcagtgacggcagtggcagtggcagcagcagtggcggtggcagcagcg
gtggcggtggcagtggcggcagtggcggcagtggcagtggcagcagcagtggcggtggca
gcagcggtggcggtggcagtggcggcagtggcggcagtggcagtggcagcagcagtggcg
gtggcagcagcggtggcggtggcagtggcggcagtggcggcagtggcggtggcagcagcg
gtggcggtggcagtggcggcagtggaagtggcagcagcaggtggcggcagtggcagcagc
ggtggcggcagcggtggcggcagcaacagcagcagcggcggcagcggcggcgacggcgct
gactacaatgatcttgacagagacagagatgaggaggtctggtgtgtgcaagacggacga
atatacgagcacggggaggattgggaggttgacagctgcacctcctgtaattgccaggat
ggaaaggtggtgtgtcagcaggtgtcttgcccccctgtgtcctgcctcaatccatccttc
attgatggaaagtgctgccctgtctgtctcaataacggagacggctggtccccatggtct
gagtggacccactgttccgtcacctgtggacgaggagggcagcaaaggggccgatcatgc
aacggcatcatgccggcctgtgctggcccgtcacttcaaacccgcagctgcatgttgatg
aagtgtgagcgcaaggcgcgtgcagatgggaactggggcctgtggtctccttggtctgcg
tgtacaaccacatgtggagagggacacatcacacgagtacgtctgtgcaacaaccctcca
ccacataagggtggaaaggggtgctcgggcagcgccagggaaacacaagcttgcaacaac
acactctgccccattgctggaggctggacgtcctggaatgaatggtcgctgtgctcagag
tcttgtggaggaggcctttcaagtcgccagagagagtgcataaaccctgtcccccagaat
ggtgggaagcgttgtgctggagacgccgtagactatgaagcttgtaacaaacaaccatgt
cccatagacacgtgtttgctgtcaaatccatgttttcctggggtgcagtgcacatcatat
agcgatggatcatgggaatgtggacactgtccgttgggtttacatggcaatggcactcaa
tgcgacgacgagaatgagtgtgaagtggagggtgtgtgttttacagagtgtgtaaacaca
gaccctgggtactactgtctgccctgtcctcatcgctacaaaggcacacagccatatggc
cttggactgcaggcagcccaggaaaccaagcaggtgtgcgaaccatacaatccttgcaaa
gacaacacacacacctgccacaagtatgctgaatgtatatacctgggcctagcatctgag
gtcttgttcaagtgtgtgtgtgctgttgggtttgcgggtgatggctttttgtgtggtgac
gactcagatctagacggctggcccaactacaaattgacctgcaagcaaaatgcgacctat
cactgtcaaaaggataattgccccacgataccaaactctggacaggaagacctggacagg
gacggactgggagacgcctgcgatcctgatgacgacaatgatgacatcatagatgagagg
gacaattgccctctggtgtacaacccccggcagtatgactcggacagagacggggtcggg
gaccgatgtgacaactgtccgtttgagagcaacccactgcagacagacactgatgacaac
ggagagggagacgcctgtagcattgacatggatggagatgaggttctgaatgatcgtgac
aactgtcccttagtctacaacactgaccagagggacacagatatggatggtgtcggagac
cagtgtgacaactgtccccttctacacaacccactgcagcttgactctgacagtgacctg
gtcggggacatgtgtgacgacaatgacgacatcgatgaggacggccaccaaaactctcta
gacaactgtccctacatccccaatagcaaccaggccgaccatgataacgacgggaggggg
gacgcctgtgaccacgacgatgacaacgacggtatccctgacgaccgggacaactgcaga
ctggtgcccaacagggaccagctggactctgacggtgatggcagtggggaagcatgtttt
gatgactttgacaacgacagtattccagatgcactagatccctgtccactgaaccaggat
attgggtctacagacttcaggaagtttcaggttgttttgctggacccacaaggcacaaca
cagtctgaccccctctgggtgatccgcagccagggtagagagctgctgcagacggccaac
tcggacccaggcatcgctttaggatacgacaagttcagtgccgtagacttcagtgtgacc
ttttacgtgaacaccaaccgagatgacgactacgcgggaattgtgttcgcctaccagtcc
acccagcgcttctatgttgtcatgtggaaacaggtgtctcaggcttactgggagaaaagg
ccatccaaagcttttggcacagcgggagtctccatcaaactggtcaactccaccacagga
ccagggcagtatctacgaaacgccctctggcacaccggaaataccagaaaccaggtcaga
actttgtggcatgaccccaataaaattggctggaaggacttcaccgcctaccgcatgcac
cttatccacagacccaaaactgggtttatcagggtggtggtgtatgagggcagggacatt
ttgtccgactcgggggcggtgtacgaccacaccctggctggaggcagactgggattgttt
gtcttctctcaggaacacgtcctcttctcagacctcagatatgagtgcagagataactga
DBGET
integrated database retrieval system
