Seriola lalandi dorsalis (Yellowtail amberjack): 111655475
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Entry
111655475 CDS
T06058
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
111655475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111655475
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111655475
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111655475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
U-box
Motif
Other DBs
NCBI-GeneID:
111655475
NCBI-ProteinID:
XP_023262671
Ensembl:
ENSSLDG00000002055
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MAEMVSLMSLEDELTCSICLSTFDCPVTTPCGHNFCQDCLLATWKETYSCPQCRTHFATK
PELKKNTVLSTVVETFNLRLNKNEESLIKEEKKPEEKMVIRCDTCMEAEASQTCLTCMAS
FCEEHLRPHRENPIFRLHQLSEPVGDLSERICPDHHKLMELFCSQHGRPICSLCLQHVHK
GCSFTSPEEQRNLKESDLRDKLGLLDEKIVKNETVINQMRDMQNKLKDSATNRKKAVAAD
YQQMRDMLTREERDSLIAVDREMESGQTKLRTLMKKFTENIDNMSKAKEDIHSLLSQSQT
LAFLQTSFTMPPAINFDPYTPRINLDSKKVMATQASGAALKDYLTEIFKQPVEARVQMIK
PGEYSGINIDTVASGERAASAFTPWNPGRHQEPEFQCPSGLPGFPMSHTPGPGSQPKAGP
KKKAPTSYSHQWEMNSLFQKQTKKPPQSAEDIQRKKLAQSMENLRDFGVKDKLRGRPHPG
EPNQTPETTDIPPNILSAEKRTELLKYGTVLTLDPRTAHKRIILSEDFTKASVSDEHANY
PNCPERFAVCSQVLTSKGFSRGRHYWEVRMSSNNFIGIGLAYGSIDRKGPTSRLGRNAQS
WCVEWFNVKLSAWHNSSETVLQNPSPKRVGVLLDCEGGMATFYNVADRAYPLHSFVFPFA
EAVYPAFWIFSSGSSISLCKLQA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaatggtttctctgatgagtctggaggatgagctcacatgcagcatctgtctg
agcacctttgactgtccggtcaccaccccctgcggacacaacttctgccaggactgtctg
ctcgctacctggaaggaaacgtacagctgtcctcagtgtcggacccacttcgccaccaaa
ccggagctgaagaaaaacacggtcctgagcaccgtcgtggagactttcaacctaaggttg
aacaagaacgaagaaagcctgattaaagaggagaaaaaacccgaggagaagatggtcatt
cggtgtgatacatgtatggaagcagaggcgtcccagacgtgccttacctgcatggcctct
ttctgcgaggagcacctgcgtcctcaccgggaaaacccaattttccgtctccaccagctg
agcgaacctgtcggtgacctgtcggagcgcatctgcccggaccaccacaagctgatggag
ctcttctgcagccagcatggccgtccaatctgcagcctctgccttcaacatgtgcacaaa
ggctgctccttcacctctcctgaggagcagaggaacctgaaagagtctgacctgagggac
aagttgggtttgctggatgagaagattgtgaagaatgagactgttataaatcaaatgagg
gacatgcagaacaagttgaaggactcagcaaccaacaggaagaaagctgtggcagctgac
tatcagcagatgcgggacatgttgacccgagaggagcgcgatagtctgattgcagtcgat
cgagagatggagagtggtcagaccaaactcaggactctcatgaaaaagttcactgagaac
attgacaacatgagcaaagctaaagaagatatccacagtcttctaagtcagtcccaaaca
ctggccttcctacagacctcatttaccatgcccccagccataaactttgacccttacacc
ccaagaatcaacctggactccaagaaggtgatggcgacacaggcctctggtgctgctctg
aaggattatctgacagagatctttaaacagcctgttgaggccagagtgcaaatgattaaa
ccaggtgaatattcaggaattaacattgatactgttgcatctggtgaaagagcagcctca
gcatttacaccttggaaccctggacgtcaccaggaacctgagtttcagtgcccttcaggg
cttcctggatttcccatgtcccacactccaggtccaggttcccaaccaaaagcaggccca
aagaagaaagctccaacttcctactcacaccaatgggagatgaactcactcttccaaaaa
caaaccaaaaaacctccacaatctgctgaagacatccagagaaaaaaactagcccagtca
atggaaaacctgcgggattttggtgtgaaagacaaactcagaggccgtcctcatccaggt
gaacccaatcagacaccagaaactacagacattcctccaaacattctatctgctgaaaaa
agaaccgagcttctgaaatatggaacggtgctcaccttggatccaaggacagcccacaaa
cgcatcatactgagtgaggacttcacgaaggcctctgtatcagatgagcacgcaaactac
cccaactgccctgaacgctttgctgtctgctcccaggttctcacctccaagggtttctct
agagggcgccactactgggaagtccgtatgagcagcaacaacttcattggcataggttta
gcttatggtagcattgaccgcaaaggtcccaccagtcggctgggccgtaacgctcagtcc
tggtgtgttgagtggttcaacgtcaagctgtcagcttggcataacagcagcgagactgtg
ctgcaaaatcccagtccaaagcgtgtaggggtgctgttggattgtgaggggggcatggct
acgttctataacgtggcagacagggcgtatcccctccactcctttgtgttcccctttgct
gaagctgtgtatccagctttctggattttctcaagtggctcatccatttctttgtgcaag
ctgcaggcatga
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integrated database retrieval system
