Seriola lalandi dorsalis (Yellowtail amberjack): 111655678
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Entry
111655678 CDS
T06058
Symbol
smg5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111655678 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111655678 (smg5)
03032 DNA replication proteins [BR:
slal03032
]
111655678 (smg5)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111655678 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
111655678 (smg5)
DNA replication proteins [BR:
slal03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111655678 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
111655678
NCBI-ProteinID:
XP_023262927
Ensembl:
ENSSLDG00000011418
UniProt:
A0A3B4XE92
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MSGPGQDSEPEAKVLLIKRLYRAVVESVHKLDVIIGSKASYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLELQDCIDWTHVTDPLIGRKKPVSATPKEMEWAQMACHRCLVYLGDLAR
YQNELAGVEAEQLAERFYHQALSVMPHVGMPFNQLGTLAGSKFYNVEATYYYLRCIQSDA
PFEGAYGNLKRLFDKAAKMYHQVKKQEMKKLSPSRQRSKDIKRLLVSFMYLQSLLQPKNS
LMETELTSLCQSVLEDFNLVLFYLPPPAHGGSHHSPSEEEEEQQQHTDSSCPVLPDTLVF
KMVVTCLMVVHSLKRGGSKQYSASIAFTLALFSHLVNHVNIRLQAELEEAESQVPPLHTD
ATDDLEMRDLSAPPTVQCDERPLQNGSLEQEDDEEEEAKDEDGCERVGAKNHSSVEEQRK
LEEDKQRQKKKYTRLSRLRRRRCARKDGRGEDESDLSEGFESEEDEDDDEEKRGRADSTG
GTTTGLPLNPSSNRKETKRDPLGEEGSWGSGSEEEEEEGGTAFDVETDSDMNSQESRSDL
EDMEDTENSDNLEGQAREHQEEEEDEEQTKEEGGDRDGDTPPTTNGPLMPSDSSISSNLQ
AMSSQLFQAKRCFRLAPTFSNMLLRPQASSSSDIPTPTDASAPPSQETPPPPGDSPCNMN
PGTANGTNEHDLDSDSEGSQHSTQSVHSEKTLLEKLEIMTNQGLIQVVKVFIDWLRTNTD
IILMCAQSSQSLWNRLSVLLNLLPDGSKMLEAELGLNAEVTELLNECEQPGLVQSLLLPE
DLALRHLPALSVAHRRLDFTHRNPSLSPLQECVVRVCCIRSFGHFLTNLQGNVLHFNPEA
GIFTSISQSEQDNLVQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQ
SSMSPYLVPDTAALCQHLNLIRQLAGSGCFIIIIPRTVIDGLDRLKKENAGARDGIRFLE
SEFRKGNRYIRCQKESGRSFERDKLKRQDIEAWHLYKMVDSCRQLTVSQNNGDEDTAGMV
TILTGHQVDELCTRSAAMKAAVQAAGSAGMELKNIVEFYRQWKEIG
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaccggggcaggacagcgagccagaggcgaaagtccttctcatcaagcggctt
tacagggctgtggtggagtccgtgcacaagctggatgtcatcatcggcagcaaagcatcc
tacagagaggtcttcaagccggagaacatcagccttcgcaacaagctgagggagctttgt
gtgaaactgatgtttctccaccctgtcgactatggccgtaaggctgaggagttgctctgg
aggaaggtatactatgaggtcatccaggttatcaagaccaacaagaagcacatccatagt
cgtagcgctttggagtgtgcctaccgtacacacctgatcgccggggttggtttctaccag
cacctactgctctacatccagtcacattaccagctggagctgcaggactgcatcgactgg
acccacgtcacagacccgctgatcggccgaaagaaacctgtgtcagccacccctaaggag
atggagtgggcacagatggcctgtcatcgctgtctggtctaccttggagatctagcccgt
taccagaacgagcttgctggagtggaggctgagcagctggcagagaggttttaccatcag
gccctgtctgtcatgccgcatgtgggaatgccttttaaccaacttggcacactggcaggg
agcaagttctacaatgttgaagcaacctactactacctacgctgcatccaatcagatgcc
cccttcgagggcgcctatggcaacctgaagcgtctgtttgacaaagctgccaagatgtac
caccaagtgaagaagcaggaaatgaagaagctatctccatctcgacaaagatcaaaagac
attaagcgtctcctggtgagcttcatgtacctccagagcctgctgcagccgaagaacagt
ctgatggagacggagctgacgtcgctctgccagtcggtgctggaggacttcaacctggtg
ctgttctacctgccccctccagcacatggtggttctcaccactcccccagcgaggaagag
gaggagcagcagcagcacactgacagctcctgccctgtgctgcccgacaccctcgtcttc
aagatggtggttacttgtctgatggtggtgcacagcctgaagaggggaggatcgaagcag
tatagtgcatccatagcttttactctggccctgttctcccacctggtgaaccacgtcaac
atccggctgcaggctgaactggaggaagcggagagccaggtgcctccacttcacactgac
gctacagatgacctggagatgagggatttgtcagctccaccgacagttcagtgtgacgag
aggcctctgcagaatggttccctggagcaagaggatgatgaggaggaagaggcaaaggat
gaagatggctgtgaaagggttggtgccaagaatcatagcagcgtggaagaacagcgcaag
ttggaagaggacaaacagaggcagaagaagaagtacacccgcctctctcgactccgccga
cgccgctgcgcccgcaaggacggccgaggagaggacgagagcgacctaagcgaaggcttt
gagagtgaagaagatgaagatgatgatgaagagaagaggggccgtgctgattcaacaggc
ggcacgacgacgggattgcccctcaatccttcctctaacaggaaggagactaagagagac
cccctgggtgaggagggcagctgggggagtggctcagaggaagaggaggaggaaggagga
acagcgtttgatgtagagaccgactcagacatgaacagccaggaatctcgctcagatttg
gaagacatggaggacacggagaactcggacaatttggagggccaggcccgggaacaccag
gaggaagaggaagatgaagagcaaaccaaggaagaaggaggcgacagggatggtgatacc
cctccgaccaccaacgggcccctcatgcccagcgactccagcatcagcagtaacctccag
gccatgtcctcgcaactcttccaggccaagcgctgcttccgcctggcaccgaccttcagc
aacatgctgctgaggcctcaagcctcatcttcctcagatatccccacccctactgacgct
tctgctcccccctcccaagagacccctccccctcctggggattcaccctgtaacatgaac
cctggtactgccaacggaaccaatgaacatgacttggactccgactcagaaggtagccag
cacagcactcagtcagtgcatagtgaaaaaaccctgttggagaagctggagattatgacc
aatcaggggttgatccaagtggtgaaggtttttattgactggctaaggaccaacactgac
attatcctcatgtgtgcacagagttctcaaagtctgtggaaccgactgtccgtgctgctc
aacctgctaccagatggcagcaagatgctcgaggctgagcttggcctgaacgcagaggtg
acagagctgttaaatgagtgcgagcagccgggtttggtccagagtctgctgctgcctgag
gatttggctctgcgacacctgcctgctctaagcgtagctcaccgccgccttgactttact
caccgcaacccttccctcagccccttacaggagtgtgtggtgcgagtgtgctgcattcgc
agttttggccacttcctcacaaatctccaaggcaacgtgctgcacttcaacccggaggcg
ggcatcttcaccagcatcagccagtctgaacaggataatctggtgcaacaggccaaggcc
cagttccgaatggctgaagaggaagctcgtcgaaatcgcttaatgagggacatggcccag
cttcgactacagttggaggtgtcgcagctagagggcagcctccagcagcccaaggcacag
tcgtccatgtctccctacctggtgccagacacagctgctctctgccagcacctgaacctg
atccgacagctggccggcagcggctgcttcatcatcatcatcccacggacagtaattgat
ggacttgacagactgaagaaggagaatgccggagcgagggatggcatccgcttcctggag
tctgaatttcgcaaaggcaacaggtacattcgctgccagaaggagtcgggtcgaagtttt
gaaagagataaactgaaacggcaggacattgaagcctggcatctatacaagatggtggac
agctgtcggcagttgacagtctcccagaacaacggagatgaagatacagccggcatggtg
accattcttaccggccatcaagtggacgagctttgcactcggtcagcagcgatgaaggcg
gcggtgcaggcggctggctcggccggcatggagctgaagaacatcgtggagttctaccgt
cagtggaaggagatcggctga
DBGET
integrated database retrieval system
