Seriola lalandi dorsalis (Yellowtail amberjack): 111655817
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Entry
111655817 CDS
T06058
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111655817
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111655817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
TPR_11
HrpB1_HrpK
TPR_MalT
TPR_2
TPR_12
HAT
Motif
Other DBs
NCBI-GeneID:
111655817
NCBI-ProteinID:
XP_023263114
Ensembl:
ENSSLDG00000015407
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAAEGGEELSGNGELEDSSAMEASEDPAPPPIEMAEMSEENGSAGAAPEAPVAPDPSSFS
MPPAVEDEEGELPADFERLWKAAHDNPQDFTSWTDLLQYCEQESHITASRRALVAFLARY
PLCYGYWKKFADLERRAGYNAKAEEVCVQGLQAIPLSVDLWIHYINLLLGTLDMNLPESP
KRIRSVFEDAVVAAGLDFHSDRLWDLYVEWEKEQGNMSNAAAVLDRVLKVPTQLYNTHYE
KFKEHLNSHEPKEVLSPEEYEELRTLCRQSQKAERAEQAQEEEEERPPGEEEPATPEGTD
TEELMQKIREQVLVRRDKVYQDNEGEVRKRWHFEDAIKRPYFHVKSLDRLQLRAWHSYLD
WEIAELNKDTKDPNQDPNQAATEGSEVTAQTHEVSEDAAVALDDHRVRILFERCLIACAL
YEEFWTRYIQYLEPQSVDEARAVYKRACEVHLTYKPNIHMQWATFEERHGDLTEARRVLE
ALEKFLPGLAVVRLRRAALERRAGHLDQSEALLQDAVAESKEKPTLHAFYSIKLARLLLK
LERNPARARRVLQEALEISPDNDKLHLNLLELEVSGDPWASAEAVQECVTRALAAPLAPH
TKILFSQRGLQFAEDYSNSIQSVLSVYEDHQKLLKELGGTKRGAENGDEDSEKLSKSEDG
SAVAVSTQVPPTMPHVPITTPPPTMMGTDMSAQTGYGGYSSWYQQPQYGSYGYQNTWNYN
QGYYPPS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaaggcggtgaggagctgagcggcaacggggagctcgaagattcttcagcc
atggaggcttctgaggatccagcaccgcctccaattgagatggccgagatgtcagaagag
aacggcagtgccggcgcagcccctgaggctccagtggcccccgacccttcttctttctcc
atgccaccagctgtagaggatgaggagggcgaactgcctgctgactttgagcgtctgtgg
aaggccgcccatgacaatcctcaagacttcaccagctggactgacctcctgcaatactgc
gagcaagagagtcacatcacagcgtcacgcagagctctggtggcctttctcgctcgctac
ccgctctgctatggctactggaagaaatttgctgatctggagcgccgtgcagggtacaac
gctaaagcagaggaggtgtgtgttcagggtctccaggctatccctctgagtgtagatctg
tggattcactacatcaatctgctgctgggaacactggacatgaacctgcctgagtcgcca
aagcggattcgcagtgtgttcgaggacgccgttgtggcagcaggtctggacttccactca
gaccggctttgggatctgtatgttgagtgggagaaggagcaggggaacatgagcaacgca
gcagccgttctggacagagtcctcaaagttcccacccagctctacaacacgcactacgag
aagttcaaggagcacctgaacagccatgagcccaaagaggttctttctccagaggagtac
gaggagctgaggacgttgtgccgccagagccagaaggcagagcgcgctgaacaggcccag
gaggaggaggaggaaaggccaccgggggaggaagagcccgccacgcctgagggcacagac
acagaggaactgatgcagaagatcagggaacaagtgctggttcgcagggacaaagtgtac
caggacaacgagggagaagtccgcaagagatggcactttgaagacgctatcaagcggccc
tacttccacgtcaagtcactcgaccggctgcagctgcgagcctggcactcctacctggac
tgggaaattgctgagctgaacaaggacaccaaagaccccaaccaagatccaaaccaggca
gccacagaggggtcagaggtcacggctcagacccacgaagtgtcagaggatgctgcagtt
gccctcgacgaccacagggttcgcatcctctttgagcgttgcctgatcgcttgcgctctg
tatgaggagttctggaccaggtacattcagtacctggagccgcagagtgtggacgaagcc
cgagctgtttacaaacgagcctgtgaggttcacctgacatataaacccaacatccacatg
cagtgggccaccttcgaggagaggcacggtgatttaactgaggctcggcgagtgctggag
gccctggagaaattcctgcctgggttggcagtggtccgtctccgcagggccgctctggag
agacgagcaggccatctggaccaatcggaggccttgctgcaggatgcggtggctgaatcc
aaagagaagcccacgttacacgctttctactccatcaagctggctcgcctgttgctgaag
ctcgagaggaaccccgccagagcccgcagagttttacaggaggcgctggagattagtccg
gataatgataaactgcacttgaacctgttagagctggaggtgtcgggggacccctgggcc
tctgctgaggcagtgcaggagtgtgtgacgcgagctctggcagcgcctctcgccccacac
accaagatcctcttttcacagagaggcctgcagttcgcagaggactacagcaactctatc
cagagtgtgctgtctgtctacgaagatcaccagaaactgttgaaggagctcgggggaaca
aagagaggagcagaaaacggggacgaggactcagagaaactgagcaaaagtgaggacggc
tctgctgttgccgtgtccacacaagtcccacctaccatgccgcatgtccccatcaccacg
ccccctccaactatgatgggcaccgacatgagcgcacagactggctacgggggatacagc
agttggtaccagcaaccgcagtacggcagctacggctaccagaacacctggaactacaac
cagggctactatcctcccagctaa
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