Seriola lalandi dorsalis (Yellowtail amberjack): 111655960
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Entry
111655960 CDS
T06058
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111655960 (npas1)
Transcription factors [BR:
slal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111655960 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
111655960
NCBI-ProteinID:
XP_023263304
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDSNCSKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCHTAPESASSSASTSSLAGTPEPAPSSPHSPADEPPDRGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSTRSMRRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFIHVEDLENLRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTELPDTPL
DLLQLPESVRAERLRVSSSPTDSSPQARGSQPVKGSLGKSDHDTKGREKFSAAAIQSEER
RKRLLRSDPEGGPPETRRRLEELRHTEESVSASSDLASESDGEEEEETEWDQGGDSDRLK
QEDGGGGGKQSRGGDTPTRGERGGRAHNGRAVIQQLKSVVTPSPLSGSPSIKTEHDSLTT
GGRWGSHTQTSTSHTTQPQPSHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPA
LSPAMSVSSPLPREERVVSGVVSRGSGGSGGGGGAPDFELLQRLAAGGAAGRVLFHPLAL
GPQGPQSLYAPSTIRYAPPELPPSHHHSAGHSDGLQLRSDHHKGPPPAFFPHLQRLAGLP
PFSGFSPSDSPFSSGLPFCMNGLRGAAGSEED
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatgccgtttgtcagcgaggggaagtgtgtgagtgtggagtgggatttccta
caaggactactggccaagcctcccaccctgccctgtctccagaacctgcgtaaagagaag
tctcgcaatgcggctcgttcacggcgggggaaggagaatttcgagttcttcgagctggct
aagatgctgcctcttcccggggccatcaccagccagctggacaaagcctcggtcatccgg
ctgaccatcagctacctgcacatgcgcacctttgccagccagggggatccgccctggagc
cctctgctggagggcgacagcaactgcagtaaagtaagacgatcatctcattctctggct
actgacatgtttgagcagcacctaggggcgcacctactgcagtctctggatggctttgtg
tttgtggtcagccaggagggaaggttcctctacatctcagagacagtttctatctacctg
ggactctcacaggtggagctgaccggcagcagtgtgttcgactacatccacccagcggac
cacgtcgagatggcggagcggctgggaatcaggccgcatcttagggccgaggccggctgc
cacacggcccctgagagcgcttccagctccgcatccacctcctccctggctggtacccct
gagcccgctccgtctagtcctcactctcctgctgacgagcctcctgatcgcggtttcttc
atccgcatgaagtccacgctcaccaaaagaggcctgcatgtcaagtcctctggatacaag
gtgatccacgtgacaggacgaatccgctgccgccccgcgctggtgccgggctccacgcgt
tcaatgcgtcgaccgatgggtctggtggcactggcgcacacacttccgccctccacgctt
aatgaagtccgcatggagagccacatgtttgtcttccgagtgaacatggacctacaggtc
acatattgtgagaacaggatctcagagtacatggatctgaccccagcagaggtggtaggt
cacacctgctaccacttcatccatgtagaggacctggaaaaccttcggcaaagccatgaa
gacttgctgaggaaaggccaggtagtgacgggttactatcgctggctccagaggagagga
ggctacctgtggatccagtccactgccactgtctccatcaaccacaaagccccccacgaa
cgcaacgtcatctgggtcaactatgtcctgagtcgaacagagttgcccgacactcccctg
gatctactgcagctaccagagagcgtaagagcagagagacttcgggttagctcctctccc
accgacagctccccccaggccagaggctcgcagccagtgaagggctcattggggaagagt
gaccatgacactaaaggtagagagaaattctctgccgctgccatccaatcagaggaaagg
aggaagcgcctgctgaggtccgaccctgagggaggtcctcccgaaacccgtcgcagactg
gaggaactccgtcacaccgaagagagcgtatcagcctcctcagacctggcgagcgaaagt
gatggggaggaggaggaagaaacagagtgggaccaggggggagacagtgacagactgaaa
caagaagacggtgggggaggaggtaaacagagtagggggggagacaccccaactagaggg
gagagaggagggagggcgcacaacggccgggctgtgatccagcagctgaagagtgtagtg
accccctctcccctgtctggcagccccagcatcaagactgaacatgactccctgaccact
ggggggcgctgggggtcacacacacaaacctccacctcgcacaccacccagccccaaccc
tcacatgcacacacaccctccagcagtctcaacggcgacagccccaccaccccgatcccc
gactcttcctccagcagtgaagcccctccaaaaggtttgttcactcccccgtcccctgct
ttgtcccccgccatgtccgtgtcctccccgctgccccgcgaggagagggttgtgtcaggg
gtggtcagtcggggcagtggtggcagcggtggtggaggtggtgctcctgactttgagctg
ctccagagactggctgcaggcggtgctgcggggcgggtcctcttccacccccttgccctt
ggcccacagggcccgcagagcctctacgcccccagcactatccgctacgctccacctgag
ctgcctccctcccaccaccacagcgcaggacacagcgatggcctgcagctacgctcggac
caccacaagggacccccgcctgccttctttccccacctacagcggctggccggcctgcca
cccttcagtggtttctccccgtctgacagccctttctcctccggcctgcccttctgtatg
aatggactgaggggggctgcaggctccgaggaggactga
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