Seriola lalandi dorsalis (Yellowtail amberjack): 111656138
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Entry
111656138 CDS
T06058
Symbol
cdrt1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111656138 (cdrt1)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111656138 (cdrt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_IP5PC_F
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR75_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
111656138
NCBI-ProteinID:
XP_023263497
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MEERNVYCGAYFTKVLLNKEDPHRVVDYRGRSFMATGSKDRAVHLFYVASETKAVSVMKG
HIGSIRAVLLCEDRDLVITASCDASIRCWSLKTDRCEMELYGHTGTVNCLDVHADRLVSG
AKDCLVKVWNLQTGNRFEDFNFKHPSSIQCVKINTTTVYSSCDRGLVKIWDMEKASLLRV
IDAHRKSVKCLFFDEWHLLSGDVNGQVMAWSVNCHAKECLMTFSHPNREVKSLTLVYLRV
VTGCVDGKIRIFNFLTGDCLRDITAEAETGSLLSLHFHDNSILVNTTSSVRLYQFAKVFW
ESAERSPGDVPAQDGSVSEKCAASLRKLPCTSFEADHKAQLASPSRKMHDCDSKKPERAE
LRYHTRFLFTPTKCQTQVSGGAAKQSVILSEKATCERMKKRGLHRPLTRDSILLRVSAIQ
RAQCTDEVSVNMECNAKLRDSWGPHMTQDPLHSDIQALKHRRAKTCDHILKRGASQTITN
TDVTTAPNTTRRHHHCLFSKETQTHTADTQRAIKRVGAKEGPQAPERILTTSLPNLEYGI
KTATSLPKINPFGPIQREGVIQAGRRCPVREGTHAEM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcgaaatgtttattgtggtgcatattttaccaaagtgctgctgaacaaagaa
gaccctcacagggtggtggactacagaggcagatcatttatggccacgggttccaaggac
cgtgcggtgcatctgttttatgtggcgtcagaaacgaaagccgtgtctgtgatgaagggc
cacattggcagcatccgggctgtgctgctctgtgaggacagagacctggtgataactgcc
agctgtgacgccagcatcaggtgttggagtttgaagacagaccggtgtgagatggagctg
tatggtcacactggcactgtcaactgcctggatgtccacgctgataggcttgtctcaggg
gctaaagactgtttagtaaaagtgtggaatctacaaacaggaaatcgttttgaggatttt
aatttcaagcacccaagctctatccagtgtgtgaaaatcaacacaaccacagtctatagc
agctgtgatcggggccttgtcaaaatatgggacatggagaaggcatcactgctcagggtg
atagatgcccacaggaagtcagtgaagtgcctgttcttcgacgaatggcatcttctctct
ggggacgtaaacggtcaagtcatggcctggagtgtcaactgtcacgctaaagagtgtcta
atgaccttcagccacccaaacagggaggtcaaatctctgacccttgtctacctgcgtgtt
gttactggctgcgtggacgggaagattcgtatttttaatttcctcactggagactgtttg
agagacatcacagcagaggctgaaacaggctctttactgtctctgcacttccatgacaac
agtatattagtgaacacaacatccagtgtgaggctgtaccagttcgccaaagtgttctgg
gagtcagcagagagaagccccggcgatgtgccagctcaggatggttcggtttctgagaaa
tgtgcggcttcactcagaaagcttccctgcacctctttcgaggcagatcacaaagcacag
ctggcttcacccagccgaaagatgcacgactgtgacagcaagaagccagagagagcagag
ctgcgttaccacacccgcttcctgtttacccccactaaatgccaaacacaagtcagtggt
ggggctgctaaacagtcagtgattcttagcgagaaggcaacgtgtgaacggatgaagaag
agaggtcttcatcgtcctttgacacgtgactccatcctccttagagtcagtgccattcag
agggcgcagtgcacggatgaagttagcgtcaacatggagtgcaacgcaaagctgcgtgat
tcctggggtcctcacatgactcaggatcctctacactctgacatccaggccctgaaacac
aggagggccaagacctgtgaccatattctgaagagaggcgccagtcaaactataacaaac
acagatgtcaccactgctcctaacaccactaggagacaccatcactgcttattttctaaa
gaaacacagactcacactgctgacacacagagggcaatcaagagggtcggtgctaaagag
gggccacaggctccggagcgcattctcacgacgtcactaccaaatctagagtacggcata
aaaactgctaccagcttacccaagattaacccttttggacccattcagagagaaggggtg
attcaggctggaagacgatgtccagtccgagagggaactcatgcagagatgtga
DBGET
integrated database retrieval system
