Seriola lalandi dorsalis (Yellowtail amberjack): 111656526
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Entry
111656526 CDS
T06058
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111656526
Spliceosome [BR:
slal03041
]
Common components
Common spliceosomal components
General mRNP proteins
111656526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
Neisseria_TspB
Motif
Other DBs
NCBI-GeneID:
111656526
NCBI-ProteinID:
XP_023264025
Ensembl:
ENSSLDG00000022188
UniProt:
A0A3B4YKR7
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MADDLDIEAMLEAPYRKEDNKAQSPNGQEERTKRKKRSRSRDKKRSRSRDRKRTRSRERK
RSRSRDKRRSRSRERRRSHSRERGGRYRDHHKHRRRTRSKSPFRKEKSPIRQPIDNLTPE
ERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVP
LAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGTSGPMRLYVGSLHFNITEEMLRG
IFEPFGRIESIQLMMDSETGRSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGHVTE
RTDASTASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAIAIG
AMAAVSAAMNPAMNPAMNPAMNPAMNPAMNPAMNPAMNPAMNPALNMNMNSAALNLPSQP
LATHCFQLSNMFNPNSEEAPGWEMDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYVKCPS
IPAAMAAVNGLHGRYFAGKMITAAYVPLPTYHNLFPESVTATQLLAAPPRR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggacatcgaggcgatgctggaggctccgtacaggaaggaggacaac
aaggctcagagccccaacggacaggaggagcgcaccaagaggaagaagcgcagtcgcagc
cgtgacaagaaacgcagcaggagtcgagacaggaagaggacccgcagtcgagagcgtaaa
cgcagccgcagcagagacaaaaggagaagtcgcagccgcgagcgccgccgcagccacagc
cgagagaggggcgggcgttacagagaccaccacaaacaccgtcggcggacgaggagtaag
agtcccttcagaaaagagaagagtccgatcaggcagcccatagataacctgactccagag
gagcgagatgctcggacagtgttctgtatgcagctggcagccaggatacgacctcgagac
ctggaggagtttttctctgctgtggggaaggtccgtgacgtgaggatgatctctgacagg
aactcccgcaggtcgaagggcattgcctacatcgagtttgtggaggcaaactcggttcct
ctggccattggactgacggggcaaaggctgctgggagttcccatcattgtacaggcctca
caggctgagaagaaccgagcagcagcagcagccaacaacctgcagaagggaacatcagga
ccgatgagactgtacgtcggctctctgcacttcaacatcactgaggagatgctgagagga
atctttgagccgtttggacggattgagagcatccagctgatgatggacagtgagactgga
cgatctaaaggctatggcttcatcacttttgcagatgcagagtgcgccaagaaagctctg
gagcagctgaacggctttgagctggctggtcgtcccatgaaggttggtcacgtgacggag
cggaccgacgcctccacagcgtcatctttcctcgacagcgacgagctcgaacgcaccggc
atcgacttgggaaccacagggcgcctgcagctcatggcccgacttgctgagggtacaggt
ctacagatccctcctgctgctcagcaggctctacagatgagtggagctatcgctatagga
gccatggctgctgtgtcagctgccatgaatccagcaatgaacccggccatgaacccggcc
atgaacccggccatgaacccggccatgaacccggcaatgaacccggccatgaacccggca
atgaacccggctctcaacatgaacatgaactcggctgctctgaatcttccctctcagcca
ctcgccacacactgcttccagctgtctaacatgttcaaccccaacagtgaggaggctcct
ggttgggagatggatatccagcatgatgtcatagaggagtgtaacaaacatggtggagtc
gttcacatatacgtcgacaagaactccactgagggaaacgtctatgtcaagtgtccatcg
atcccagctgccatggctgccgtcaacggcctacacggaagatactttgcaggtaagatg
atcacggcggcgtacgtccccctgcccacttaccacaacctgttcccagagtcagtcacc
gccacacagctactggccgcgcccccacgacggtga
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