Seriola lalandi dorsalis (Yellowtail amberjack): 111656588
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Entry
111656588 CDS
T06058
Symbol
puf60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111656588 (puf60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111656588 (puf60)
Spliceosome [BR:
slal03041
]
Complex A
U2 snRNP components
U2 related factors
111656588 (puf60)
Complex B
111656588 (puf60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF1543
Motif
Other DBs
NCBI-GeneID:
111656588
NCBI-ProteinID:
XP_023264103
Ensembl:
ENSSLDG00000024011
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLGQQMGIPQAVMAAQAPGVITGV
TPVRPPIPVLPQVGLVNPVLASPPVLSNQAGGSNQQEKKEEKEEMLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGSVNRVIIY
QEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggttacggagactgcgggaggtgaagctctgacgatggagaatggacagggcaca
ggctccaagcttggcctgccgcctctcactccagagcagcaggaggcacttcagagggca
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcagaccattgcccat
cagcaacaacagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcaacgtgctctagccatcatgtgtcgg
gtgtatgtgggctccatatactatgagcttggtgaggacaccatcagacaggcctttgcc
cccttcggcccaatcaagagcattgatatgtcttgggattctgttacaatgaaacataag
gggtttgcctttgtggagtatgatgtgccagaggctgctcagctggctctggagcagatg
aactcagtcatgttgggggggcgaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcgcgcgcctttaaccggatctacgtg
gcatccgtccaccctgacctgtcagatgatgacatcaagagtgtgtttgaggccttcgga
aggatcaagtcttgcacgttagccagagaccccactacagggcgacacagaggctttggc
ttcattgagtatgaaaagcctcagtcagccctggacgctgtgtcttctatgaacctcttt
gacctggggggtcagtacctacgagtgggcaaagcagtgactccaccaatgcccctactg
acccccacgacccctggtggtctgccacctgctgcagctgtggctgcggcggcagccact
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagccggcgcatcagtcttgggggcgttagctgcgccccaacttctcggtcag
caaatgggaatacctcaggctgtcatggctgcccaggcaccaggggtcatcacaggtgtg
actccggtgcgtcctcccataccagtgcttccccaggttggtcttgtgaacccagtgctt
gcatcaccgccagtcctgtctaatcaagctggtggctccaaccaacaagagaagaaagag
gagaaagaagagatgcttcaggatggtacagggcaggagatgttgagtgaccaagagcac
atgagcatctcaggcagcagtgccaggcatatggtgatgcagaaactgcttagaaaatca
gagtccacggtgatggtgcttcgaaatatggttggaccagaggacattgatgacgacctg
gagggtgaggtgacggaagagtgtggcaaatttggctctgtcaacagagtcattatttac
caggaaaagcaaggagaagaggaggatgcagatatcattgtcaaaatctttgtagagttt
tccatggcctcagagatgaacaaagctatccaggccctcaatgaccgctggttcgggggt
cgcaaggttgtcgcagaggtgtatgaccaagaccgtttcaacagcagtgacctgtctgca
taa
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