Seriola lalandi dorsalis (Yellowtail amberjack): 111656631
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Entry
111656631 CDS
T06058
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
slal00535
]
111656631
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111656631
04091 Lectins [BR:
slal04091
]
111656631
Proteoglycans [BR:
slal00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
111656631
Glycosaminoglycan binding proteins [BR:
slal00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
111656631
Lectins [BR:
slal04091
]
C-Type lectins
Lecticans
111656631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
EGF_MSP1_1
I-set
Izumo-Ig
EGF_3
Motif
Other DBs
NCBI-GeneID:
111656631
NCBI-ProteinID:
XP_023264192
Ensembl:
ENSSLDG00000024404
UniProt:
A0A3B4YQ01
LinkDB
All DBs
Position
Unknown
AA seq
1572 aa
AA seq
DB search
MIRWTVLLCVCLNVISATFDYMYEEHSFMDPEDVLSVSIPLEGPQRPLLGVTMVLPCYFE
DHTVPDPGAPTIAPLSHRIKWSLVTKEKVTTILVALEGQVRITESYLDRVQLVGYPGTPT
DASIKISELRSSDTGVYRCEVQHGIEDNHDIVHVQVQGIVFHYRAIMGRYSLTFEKAKAA
CTENSAVMASPEQLQAAYDDGFHQCDAGWLSDQTVRYPIHDPRVNCYGDKEELPGVRTYG
VRDLNETYDVYCFAEKMTGRVFYTASAEKFSFSEAVEACSKQGARLATTGQLYLAWQGGM
DVCNAGWLGDRSVRYPINIRRPQCGGGLLGVRTVYLHTNQTGYPFPESRYDCFCYTESPD
EEGSGIIEEGSGMLSVTTVTQSPEVFFMRTTTESEAIGEVETQQPTVVDFTYTDSPTELP
LPQPPNATELITDLIKPVTARPDVGRDPSRTLVMPPTGVVFHYRSGSARYAFTFVEAQLA
CQRIGASIATPEQLQAAYEAGYHQCDAGWLLDQTVRYPIVSPRDKCGGDLGYHPGVRSYG
LRPADERYDVYCYIDGLKGEVFHVGSAEGFTYDEAVSSCQEQNAILASTGELYAAWKMGF
DKCRAGWLVDRSVRYPINNPRAQCGAGKSGVHTVYVDPNRTSYPDPDAKFDAYCFRADVL
LIANETGLNITDIQEVLLNLTAITDLLRPAVPSIAPPIPVETSGSGSGSADFSSGLGSAV
DSASGGHSGDLSCSGDLSGSGDQVVSGDQSASGDLSGSGDQVVSGDQSASGDQVVSGDLS
GSGDQVVSGDQSASGDLSGSGDQVVSGDQSASGDLSGSGDQVVSGDQSASGDLSGSGDHI
TSGDQSASGDLLGSGDQVTSGDQSASGELSGSGDLPGSVTDKLVSGESGLSSADASGSGL
SGEESGFTVVFSGIDSIVSGESSVSGGLQEAEEGSTGILIFDSSDAGSGVLSGSGDQSGY
SSGSGFSSVESGSSSDISGESGEFSGMTSGFLTSRDFSGFSGFSSGFSSGSASGESGELS
GSGDPQILLIDDEMIDASAPITHREHELGGGRLVFSGSGDISGSGILSGDLSGSASGSGS
EFGSGFFSDVTFVGSGLTELSLSSSGEQEASGFLLYSSGQGSGEHLSGFGSSSSGSGSEM
SGSGMSGSESSASGEEGSVTFLSGDFITEVSRDATLSLELGQGSVEYSGDGSSSSSGFYS
GSGDGYSSTASGSSSGASSGYLTQVVLPSPSSEWALTGSTTGPEEARSGADPSQTHHDVY
VTQGPALAPAGLAAPPTAATPASVQTPGIVEKTESVAGGFDPCDPNPCGAASCTVEDGVA
LCHDVDVCHSNPCANGATCVESADSYKCLCLPSYGGERCEIDEQQCEEGWTKFQGNCYLH
FSDREMWLDAEGRCRDLNAHLVSIITPEEQDFVNSNAQDYQWIGLNDKTVENDFRWTDGT
PLQFENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKKGPVSCGAPPEVE
NAHMFGNKREEYPVNSIIRYQCNPGFKQRHPPVVRCKADGQWEKPQVECTDVKARKRIQR
KSSRSPASSKLH
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtggaccgtgttgctgtgtgtgtgtctgaatgtcatctcagcaacatttgac
tacatgtatgaggagcactccttcatggacccggaggatgtgctgagtgtgagcattcct
ctggaggggccacagcgccctctactgggagtaacgatggtactaccgtgttactttgag
gaccacactgtcccagacccaggagctcccaccatcgcccccctctctcatcgtatcaaa
tggagcctcgtcactaaagaaaaagtcacgaccatccttgtggccttggaaggacaagtg
cgtatcacagagagctacctggacagagttcagctggtgggttaccctggaaccccaaca
gatgctagcatcaagatatccgagctacggtccagtgacacaggagtgtatcgctgtgag
gttcagcatggcatcgaggacaaccacgacatcgtccatgtgcaggttcaaggtattgtg
ttccactaccgggccatcatgggtcgctacagtttgacttttgaaaaggcgaaggcagca
tgcaccgagaacagtgcggtcatggcttcacctgaacagcttcaagcggcatacgatgat
ggtttccaccagtgtgacgccggctggctctctgatcagactgtcaggtacccaatccat
gaccctcgtgtgaactgctacggtgacaaagaggaactgcctggggtcaggacgtatgga
gtcagagacctcaatgagacttacgatgtctactgcttcgctgagaagatgacaggcaga
gttttctacactgcttctgcagaaaagttcagcttctctgaggctgtggaggcgtgctct
aagcagggagctcggctggccaccacaggtcagctctacctggcctggcaaggtgggatg
gatgtctgtaacgccggctggctgggagaccggagcgtccgctatcccatcaacattcgt
cggccacagtgtggggggggtctgttgggtgtgcgaacagtttacctccacacaaaccag
acaggatacccattccctgaatcacgctatgattgcttctgctacacagagtcccctgat
gaggaaggttcaggcatcatagaagagggaagtggcatgctgagtgttaccacggtgaca
cagagcccagaggtgttcttcatgaggacgaccacagagagcgaggcgatcggagaggtg
gagactcagcaacccaccgttgtggacttcacctacacagatagccccaccgagctgccg
ctgcctcagccgcccaacgccactgagctcatcaccgatctgataaagccagtcaccgct
cggcccgacgtaggccgggatcccagcagaacccttgtgatgcctccaactggtgtggtc
ttccattaccgctcaggctccgctcgctacgcgttcaccttcgttgaggctcagctagcc
tgtcagagaattggagcctccatcgccacgccagagcagctgcaggcagcatacgaggct
ggatatcaccagtgtgatgcaggatggttactggaccagactgtaaggtatcccattgtt
tcccctcgagataagtgtggtggagatctgggataccatcctggagttcggtcttatggt
ttgaggccagcagacgagagatacgacgtgtactgctacattgatgggctcaaaggtgag
gttttccacgtgggatcggctgagggtttcacctacgacgaggctgtttctagctgtcaa
gagcaaaacgcgatattggcctccaccggagagctctacgcagcctggaaaatgggtttc
gacaagtgccgcgctggctggctagtggatcgtagcgtccgttatcccatcaacaaccct
cgtgctcagtgtggagcagggaaatcaggagtgcacaccgtgtacgttgaccccaaccgg
acaagctaccctgatcctgatgctaaatttgatgcatactgtttcagagcggacgttcta
cttattgcaaatgagactgggctgaacatcacagatatccaggaggtcctcctcaacctg
acagcaattactgatttgttgaggcctgctgttccctctatcgcccctcctatccccgtg
gagacatcaggctctggttcaggctcagcagacttcagctcgggtttagggtctgcagtt
gatagtgcctctgggggtcactctggagacctgtcctgttctggagacctctctggttct
ggagaccaggttgtgtctggagatcaatctgcttctggagacctctctggttctggagac
caggttgtgtctggagatcaatctgcttctggagaccaggttgtctctggagacctgtct
ggttctggagaccaggttgtctctggagatcagtctgcttctggagacctgtctggttct
ggagaccaggttgtctctggagatcagtctgcttctggagacctgtctggttctggagac
caggttgtctctggagatcagtctgcttctggagacctgtctggttctggagaccatatt
acctctggagatcaatctgcctctggagacctgttaggctctggagaccaggttacctct
ggagatcaatctgcttctggagagctgtctggttctggagacctgcctggcagtgtgact
gataagctggtcagtggagaatcaggtcttagcagtgcggacgcttctggatcaggtctt
agtggagaagaatccggcttcactgttgtgttttcaggcattgacagcattgtctctgga
gagagctcagtttcaggaggactccaagaagctgaagaggggagcacagggatccttatc
ttcgattcatctgacgcaggctctggagtgctcagtggtagcggcgaccagtcaggatat
agctcgggatctggattcagctctgtggagagtggctcttcctcagacatctctggggaa
agtggagaattctctggcatgacgtccggtttcctcaccagccgggacttttctgggttc
agtggtttctcatcaggtttctcctctggaagtgccagtggagagtcaggagagctttca
gggagtggagaccctcagatcttgctgattgatgatgaaatgattgatgcatctgctcct
attactcacagggagcatgagctcggaggaggccgactggtgttcagtggctctggagac
atttcaggatctggcattctcagtggtgatctcagtggctcggcttcagggagtggctca
gagttcggctcagggttcttctcagatgtgacctttgtggggtcagggttaactgaactg
tcattgtcatcctctggagagcaggaggcctctgggtttttactctacagctctggacag
ggaagtggtgaacatttatctggatttggaagctcaagttctggatctggatcagaaatg
tctggatcaggaatgtctggatctgagtcctctgcaagcggagaagaaggcagtgttaca
ttcctgagtggggatttcataacagaggtatccagagatgctacactgtctttggagctt
ggacaggggtctgtggagtacagtggagacggaagcagtagcagcagtggcttctattcg
ggcagcggagacggctactcttccacagccagcggcagttcatcaggagcttcctctgga
tatctgacgcaggtggtgctgccctctccatccagcgaatgggcactcacagggagcacg
acaggaccggaggaggcccgtagtggggctgacccgtcacagacccatcatgatgtctac
gtgacccaaggccctgcactcgcccctgcaggactggctgctccccccaccgcagctaca
ccagcgtccgtgcagacaccaggcattgtagaaaaaactgagtcagtagcaggtggcttt
gacccatgtgaccccaacccctgtggtgctgcttcgtgcacagtagaggatggagtcgct
ctttgccatgacgtagatgtgtgccattccaacccgtgtgccaatggagccacctgtgtg
gagagtgcagactcttacaaatgcttatgcctgcccagctatggaggggaacgctgtgag
atcgatgagcagcagtgtgaagaaggttggacgaagtttcaggggaactgctacctgcac
ttctctgacagagagatgtggctagatgcagagggtcgctgccgggacctgaacgcccac
ctggtcagcatcatcaccccagaggagcaagactttgtcaattcaaacgcacaggactac
cagtggattgggctcaatgacaagacagtagaaaacgacttccgctggacggacggcact
ccactgcaattcgagaactggaggccaaaccagccagataattacttcaactcgggagag
gactgtgtggtgatgatctggcacgagaacggccagtggaacgacgtgccctgcaactac
cacctgccattcacctgcaagaaaggcccagtgtcttgtggcgccccgccggaggtcgaa
aacgctcacatgtttggtaacaagagggaggagtaccccgtcaactccatcatccggtat
caatgcaacccaggatttaaacagcgccacccaccggtggttcgctgcaaagcagacgga
cagtgggagaaaccccaggtggaatgtaccgacgtgaaagccagaaaaagaatacagcgg
aagtccagcagaagtccggccagtagcaagcttcactga
DBGET
integrated database retrieval system
