Seriola lalandi dorsalis (Yellowtail amberjack): 111656804
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Entry
111656804 CDS
T06058
Name
(RefSeq) thrombospondin-4-B
KO
K04659
thrombospondin 2/3/4/5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04145
Phagosome
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111656804
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111656804
09144 Cellular community - eukaryotes
04510 Focal adhesion
111656804
09142 Cell motility
04820 Cytoskeleton in muscle cells
111656804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111656804
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111656804
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111656804
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Opsonins
111656804
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111656804
Exosomal proteins of colorectal cancer cells
111656804
Exosomal proteins of bladder cancer cells
111656804
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111656804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
DUF7630
cEGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
111656804
NCBI-ProteinID:
XP_023264432
Ensembl:
ENSSLDG00000005407
UniProt:
A0A3B4WSC0
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MGVWTALILASHLLLKLCLHVEAQALVYDLLTSPDCLPDLLQGGLAEQGVNEAFILASFK
LQPKTGTTVFGLYNPRDNSKYFEFTVMGKLNRAVLRYLRTDKRMSSVTFNNLVLADGQQH
RLLFHLRGLQQQGPGGVELHLDCRLVETVRDLPAAFQGLPAGYGMVELKTMQAREQESLD
ELKLVVGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMLELTKVINELKDVLIQQVK
ETSFLRNTISECQACGLGGTEVVKPRCTPGVCFRDDMCIETADGVECGPCPDGYTGDGFN
CDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYTGLPVEGVGVLFAQTNKQVCDDIDEC
KEPNNGGCTANSVCHNSVGSYQCGSCKSGFTGDQVKGCKPEVSCSNSLTNPCDVNAQCFV
ERDGSVTCQCGIGWAGNGYLCGKDTDIDGYPDEKLKCKDVSCRKDNCIYVPNSGQEDADR
DGHGDACDDDADGDGIPNEQDNCWLKPNLDQRNSDKDSHGDACDNCRMVENPDQRDTDSD
GKGDACDDDMDGDGLKNFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDIDNDL
VGDSCDTNQDSDGDGHQDTKDNCPFVINSSQLDTDKDGLGDECDDDDDNDGIPDSKPPGP
DNCRLVPNPDQTDDNNDGVGDVCESDFDQDKVIDRIDNCPENAEVTLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKSGPGEHLRNSLWHTGDTN
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRARFYEGTELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSTQHGADSL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgtggacagccttgatactggcctcgcatctgctattaaaactgtgcttacac
gtggaagcccaggctctagtctatgatctgctcacctcgcctgattgcctgccagacctg
ctgcaggggggtctggctgagcaaggggtgaatgaggctttcatcctagcctccttcaag
ttgcaacccaagaccggaaccactgtgtttggcctgtacaacccacgggacaacagcaag
tactttgagttcaccgtgatggggaagctcaacagagctgtgttacgctacctgcggact
gacaagaggatgagctcggtaaccttcaacaacctggtgctggcagacggccaacaacac
cgactgttgttccacctgagggggctgcagcagcaggggccaggcggggtggagctgcat
ctggactgcaggctggtggagacggtcagggatctccctgctgccttccagggtttgcca
gcaggctatggtatggtggagctaaagaccatgcaagccagagagcaggagagtttagac
gagctcaaactggtggttggagactcctttgagaatgttgcttcattacaagactgccat
ttccaacaaagggactccgtccaaactctgggggtcaatacgaagcagctgtcaaatcaa
atgctggagttaacaaaggtgataaatgagctgaaagacgtcctcattcagcaggtcaaa
gagacctcattcctcagaaacaccatctccgagtgtcaggcctgcggcctgggtggaact
gaggtggtgaaaccaaggtgtaccccaggtgtctgtttccgtgacgatatgtgtatagag
acagcggatggtgttgagtgtggaccctgtcctgatgggtacactggggacggtttcaac
tgtgatgatgtggacgagtgccagtttaacccctgcttccccggagtgaagtgcgtgaac
actgccccgggcttccgctgcgacgcctgtcctctgggctacaccggcctgccagtggag
ggtgtgggagttctgttcgctcagaccaacaaacaggtgtgcgacgacattgacgaatgc
aaagaacccaacaacggaggctgcaccgcaaactcagtctgtcacaactctgtgggctcc
tatcagtgcggcagctgtaagtcaggtttcacaggagatcaggtgaagggttgtaagcca
gaggtcagctgcagcaacagcctgaccaacccctgtgatgtcaacgcccagtgctttgtg
gaaagagatgggtcagtcacttgtcagtgtggaattggctgggccggtaacgggtacctg
tgcgggaaggacaccgacattgatggatacccagatgaaaaactcaaatgcaaggatgtg
agctgtagaaaggataactgcatctacgttcctaactctggtcaagaggacgccgacagg
gacggccatggagacgcctgcgatgacgatgcagatggtgatggtattccaaacgagcag
gacaactgctggttgaagcccaacttggaccagaggaacagtgataaggacagccacggc
gatgcctgtgacaactgtcgcatggtggagaaccctgaccagagggacactgacagcgac
ggcaaaggggacgcctgtgatgacgacatggatggagatggcctgaagaacttcctggac
aactgccagcgagtccagaacagagaccagctggaccgggacggagacggcgtgggagat
gcctgcgacagctgccccgacatccccaacccgaaccagtctgatattgataacgacctg
gttggagactcctgcgacacaaaccaagacagtgatggcgacggtcaccaggataccaag
gataattgcccattcgtgatcaatagctcccagctggacaccgacaaagacgggctgggt
gacgagtgcgacgatgatgatgacaatgatggtatcccggactctaaaccacccggacca
gacaactgtcggctggtgccaaaccctgaccagactgacgacaacaatgatggagttgga
gacgtgtgtgagtctgactttgaccaggacaaagtgattgacaggattgacaactgtcct
gagaatgccgaggttaccctgactgacttcagggcctatcagacagtggtgctggacccc
gagggcgacgcccagatcgaccccaactgggtcgttttaaaccagggaatggaaattgtt
cagaccatgaacagtgatccaggacttgctgttggttacaccgctttcagtggagtggac
tttgaggggacatttcacgtgaatacagtgactgacgatgactacgccggcttcatcttt
ggctaccaggactcatcctccttctacgtggtgatgtggaagcagactgaacagacctac
tggcaggcgacacccttcagagctgtggccgagcccggcatccagcttaaggctgtcaag
tctaaatccggccccggggagcacctgagaaactcgctgtggcacacgggagacaccaac
gaccaggtgcgtctgctgtggaaggaccccaggaatgtgggctggaaggacaaggtgtcc
taccgttggtacctgcagcaccgcccacaggttgggtacatcagagcacggttttatgag
ggaactgagctggttgcagactctggtgtgactattgacacgactatgagaggaggacga
ctcggtgtgttctgtttctctcaagaaaacatcatctggtccaatttgaaataccgctgc
aatgacaccatccctgaggatttccaggagttcagcactcagcacggcgctgactcactc
taa
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