Seriola lalandi dorsalis (Yellowtail amberjack): 111656818
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Entry
111656818 CDS
T06058
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111656818 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111656818 (nup54)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111656818 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
111656818
NCBI-ProteinID:
XP_023264460
Ensembl:
ENSSLDG00000006711
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MAFSFGGATGNTAASAPGFSFGTFGAKTTASTAFGFGPAATTTTASSGFGTLTAPGFGAA
TTTAAAAPATGFGFGSTNTGFGGLGAGNTTAGAFGGFGTTTTTAAPAGSTFSFAAPSNTA
GGLFGNTQNKGFGFSSGLGTGTAAGATGFGTGLGTTGLGGFGGFNIQSTQQQQGGLFGQQ
AQQQGQAQPTHLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNPPVDFT
LENPFCRFKAVGYSCVPVSKDEDGLVVLVLNKKEADVRVQQQQLVESLHKVLGSNQTLTV
NVDGVKALPNDQTEVIIYVVERSANGTSKRIPATTLFSYLEQANIKVQLTQIGVAMSVTR
TELSPAQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMTK
QHQTRVDIISSDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQV
DEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIKQ
HLKQQQDGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgccacgggaaacacagctgcaagcgcccctgggttttca
ttcggtacatttggtgctaagaccacagcatctacagcttttggctttggccccgcagcc
accaccaccaccgcctcatccggattcggcactctaacagctcctggttttggggcagcc
accaccactgctgctgctgcaccagccacaggatttggttttggctccaccaacactgga
tttggggggctgggagctggaaacaccacggctggtgcatttggtggctttgggacgacc
acaacaactgctgctccagcagggtccacttttagctttgctgctccctccaacaccgca
ggaggcctgtttggtaacacgcagaacaaagggtttggtttctcctctgggctcggcaca
ggaaccgctgctggggcaacaggatttgggactggattaggaacgactggcctgggtggg
tttggaggctttaatatccagtcaactcagcagcagcaaggaggcttgttcggccagcag
gcccagcagcagggtcaggctcagcccacccacctttaccagcaggtcactgctctgtca
gctcccaccttgttgggagatgagcgtgactccatcttagctaaatggaaccagctacag
gcatactggggcacagggaagggctactacagcaacaacaacccacctgtggacttcaca
ctggagaacccattctgcaggttcaaggcagtgggctatagctgtgtcccagtcagtaag
gatgaggatggtttagtggtcttggttctcaataaaaaggaagctgatgtgcgagtgcag
cagcagcagctggtggagtctctccataaggtcctgggaagcaaccaaacactcactgtc
aatgtagatggtgtcaaagccctgccaaatgaccagacagaggtgatcatttacgtggtg
gagcgttctgctaatggcacctccaagcggatccccgcaaccacactcttcagttatctg
gagcaggccaacatcaaggtccagctcacacagattggagtggccatgtctgtcacacgc
acagagctgtcaccagcacagctcaaacagctgctgcaaaatgctcccgcaggagtggac
cctatcatttgggagcaggccaaggtagacaaccctgacccagagaagttaatcccagta
cctatggtgggttttaaggagctccttcgcaggctgcagatccaggagcagatgaccaaa
cagcatcagaccagagtggatataatctccagtgacatcagtgaactgcagaagaaccag
gcaaccacagtggcaaagattgcccaatacaagaggaaactgatggatctctctcacaga
gtgctgcaggtgctgattaaacaggagattcagaggaaaagtggttacgctatccaagtg
gatgaggagcatctcagggtgcagctggacaccattcagtctgaactcaatgctcccaca
cagttcaagggtcggttgaacgaactaatgtcccaaatccggatgcaaaaccactttgga
gctgtgagatcagaagagcgctacagtgttgatgcagacctgctcagagaaatcaaacaa
cacttgaagcagcagcaggatggtttaagtcatttgatcagtgtcatcaaagacgacttg
gaagacatcaaacttatagagcacgggctgagcgacagtggacacatgagaggaggcatc
ctgagctga
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