Seriola lalandi dorsalis (Yellowtail amberjack): 111656923
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Entry
111656923 CDS
T06058
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111656923 (vps50)
Membrane trafficking [BR:
slal04131
]
Protein recycling
Others
EARP complex
111656923 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
111656923
NCBI-ProteinID:
XP_023264601
Ensembl:
ENSSLDG00000012930
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIDSIEEV
YFSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQSAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVLHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHCTMQWHEEHDKQENTPTPDD
AAAAAESDELVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVI
SRLMQVGEEFCGSKSEVLQESIKRQSINYFKNYHRARLEELRMFLENETWELCPVKSNFN
IAQLHCISVPSSPNQEFKFMGQCRSPSVSPSRQAVTSSTLAQEELSLFQQYLQEGNPFEM
HIEHKEEETEDVLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPLKSVSR
ETIRSKKKSDYNLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYY
LYAVYTFFGRNDMPVPSPSLSTRSGREAGPASVVGPACLYESSGLGLISSRLRTTLNRIQ
ESLIDMEAVGENAGVHGPGEDRKEKVPSPHLSQLVVLTNSGSLYGLAQRVVATESLVFLA
EQFESLQSHLDTMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAG
VKWDIREIMSQHNVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLV
EGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQF
IKNHREYSMKQLANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctctcatggcccggcagggcctgaaaagcccccaggagagcatg
gcagacctcagtcctgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
agggagcagcccatcgacccccaggcggagcaggagatcatcgacagcatcgaggaagtc
tacttctctaatgactcctttgacatggtgcagcacgaactggagaaactcccacctgag
ctgaatctgcaggagctggaggagtatagagacaaactgaagagacaacagtcagcagtt
tctaaaaaggttgcagatctcattctggagaaacagcctgcgtatgtcaaggaactggag
agagtgacggcgttacagaccaatctgcagttggcagcagtcatttgcactaatgcaagg
agacaactgagcgttgcgaaggaaggattcacagaggccagcctgggcctactggccaat
cagagaagacgacaactgctgacaggcttgcttaaatctctgaggaccatcaagacgctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactacccaggtgcaatc
cagctctgtctggaatgtcagaaggctgccagcacctttaaacactacagctgcatcagt
gaattgaattccaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctctccaagacttgtaagcactttgatgttttgcactacaccaaggtgcagctggcctac
aagctcctgggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacagtgttccaagtggtgctgggatacgtggagctgtgtgctggcaacgct
gacaccaagttccagaagatgcaatacaaggacctgtgcacgcatatcaccctggacagc
tacattccctgcctgacagatctgtgcaaggcattgtgggaggtgatgctgagctaccac
tgcaccatgcagtggcacgaggagcacgacaaacaggagaacacacccactccagacgat
gcagcagcagcagcagagtctgatgagttggtggtggaccgcagctatgtgaagaagaaa
ctggagcatggactgacacggatctggcaggatgtccagttgaaagtgaaggcctacatc
ctggggacagacatgtctaacttcaaatacgacgatttcatagtggtactggatgtcatc
agcaggttgatgcaggtgggcgaggagttctgtggcagcaagtcagaggtcctgcaggag
tctatcaaacgccaaagcatcaactactttaaaaactatcacagggcacgactggaagag
ctaaggatgtttctggaaaatgagacatgggaactgtgtcctgtcaagtctaactttaac
atcgcccagctccattgtatctctgtcccatcttctccaaaccaggagtttaagttcatg
ggccagtgtcgctctccatccgtgtccccgagcagacaggccgtgacctcgtccaccttg
gcccaggaggagctgtctctgttccagcagtaccttcaggagggaaacccattcgagatg
cacatcgagcacaaagaggaggagacggaggatgtgctggcatctaacgggtatgagtcg
gatgagctggagaagagtgtgtatcaggattacgacagcgacagtgatgttcctgaggag
ctcaagcaggactacgtggacgagcagacgggtgacgcccctcttaagagtgtgtcccgc
gagaccataagaagcaagaaaaagtctgactacaacctcaacaaaaccaatgcaccaatc
ctcaccaacaccaccctcaacgtcatccggcttgttggaaagtacatgcagatgatgaac
atcctgaagccgatcgcctttgacgtcatccactgtgtgtcacagctctttgactactac
ctgtacgctgtatacaccttctttggacgcaatgacatgcctgtcccaagcccgtctttg
tcaactcgtagtggcagagaggcgggtcctgcctcggtggtgggccctgcttgtttgtat
gagtcatcgggtcttggccttatcagcagcagactgagaaccacactgaaccggatccag
gagagcctcattgacatggaggctgtaggggagaatgcaggagtccacggccccggagaa
gacaggaaggagaaggtgcccagcccccatctcagtcaactggtggtcctcactaacagc
gggagtctttatgggctggctcagagggtggtggctacggagtctcttgtgtttctggct
gagcagtttgagtcgctccagtcgcacctggacacaatgatgcctgcagccaagaagcct
ttcctgcaacagttttattcccagacggtgtctacagccagtgaactgcggaaaccaata
tattggattgtggcagccaaggccatcgactacgaacaaatgctactcttgatggctgga
gttaaatgggacattagagagataatgtcacagcacaatgtgtacgtggacgtcctgtta
aaggagtttgagcagtttaacaagcggctgggtgacgtttccagacatgtgcgcatccca
ctgcctgtgtccaacgtcctgtgggagcactgcatccgtctggccaacaggactcttgtt
gagggctacgctaacgtgaagaaatgtagcaatgagggccgggccctgatgcagctggac
ttccagcagttcctcatgaagctggagaagctgaccgacctgcgacccatccccgataaa
gagtttgtcgagacctacatcaaggcttattacctgacggagaacgatatggagcagttt
atcaagaatcacagggagtactccatgaagcagctagccaacctggtgaacgtttgcctg
ggctcacatataaacaagaaggctcgtcagaaacttctggcagccatcgatgacattgac
agacccaagagatag
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