Seriola lalandi dorsalis (Yellowtail amberjack): 111657104
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Entry
111657104 CDS
T06058
Symbol
vcl
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04510
Focal adhesion
slal04520
Adherens junction
slal04810
Regulation of actin cytoskeleton
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111657104 (vcl)
04520 Adherens junction
111657104 (vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111657104 (vcl)
04810 Regulation of actin cytoskeleton
111657104 (vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
slal04812
]
111657104 (vcl)
04147 Exosome [BR:
slal04147
]
111657104 (vcl)
Cytoskeleton proteins [BR:
slal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
111657104 (vcl)
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111657104 (vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
DASH_Spc34
Mob_Pre
PSI_PsaF
Motif
Other DBs
NCBI-GeneID:
111657104
NCBI-ProteinID:
XP_023264865
Ensembl:
ENSSLDG00000019969
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLSAPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAASMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPILISGIKIFVTTKTSGSQGVEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALGLIDSKMAQAKNWLRDPNAQPGDAGEQAI
RQILDEAGKVGELCAGKERRDILGTARTLGQMTDQVSEMRARGQGASPAAMQKAQQVSQG
LDVLTGKVENAARKLEAMTNSKQAIAKRIDAAQNWLADPNGGPEGDENIKALLTEAKKIA
DMCEDPKERDDILRSIGEIAAMTAKLSDLRRQGKGDTPEARALAKQIATALQNLQSKTNK
AVANSRPAKAAVHLEGKIEQAQRWIDNPSMDDSGVGQAAIRGLVAEGRRLANALPGPYRQ
ELLGKCEQVEQLMAQLADLAARGEGDSPQARAVAQQLQEALKDLKGKMQEAMTQEVSDIF
SDTTTPIKLLGVAATAPLDAPNRDEVFDERAANFENHANKLGTTAEKAAAVGTANKSTVE
GIQAAVKSTRDLTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLEKCRVAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REVVKAASDELSQTISPMVMDAKAVAGNIQDPSLQKGFLDSGYKILGAVAKVREAFQPQE
PDFPPPPPELDQLNLNDEAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGDMVNEPMM
VAARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagaaagtattctggagccggtggctcagcagata
tcccatctggtgataatgcacgaagaaggtgaagttgacgggaaagctatcccagatctg
tcggcgccggttgctgccgtgcaggcggctgttagcaaccttgtgcgggtggggaaggag
actgtacaaaccacagaggaccagattatgaaaagggacatgccaccagcttttatcaaa
gtggagaatgcatgcactaaactggtgcaggctgcctccatgctgaaagccgatccatac
tctgttcctgctcgggattacctcatcgatggctcccggggcatcctctctgggacctct
gacctgctcctgacctttgatgaggctgaggtccgcaaaataatccgcgtatgcaaaggc
atccttgagtacctgacagtggcagaggtggtggagtccatggaggacttgatcacatac
acaaagaaccttggaccaggaatgacaaagatggcaaagatgatcgatgagcgacagcag
gagctgacccaccaggagcaccgcgtgatgctggtcaactccatgaacacagtcaaagag
ctgctgcccatcctcatttcaggtatcaaaatatttgtgacaaccaagacgtctggcagc
cagggtgtggaggaggccttgaagaaccgtaacttcactgttgagaagatgagcgccgag
ataaacgagatcatcagagtgctgcagctgacgtcctgggatgaggacgcctgggccaac
aagaaggacacagaggccatgaagagggctctggggctcatcgactcaaagatggctcag
gctaagaactggctgagggatccaaatgctcaaccaggggacgcgggcgagcaggccatt
cgacagatccttgatgaagccgggaaagttggtgaactgtgtgccgggaaggagcggcgg
gatatcctgggcacggccaggaccctgggccagatgactgaccaggtgtctgagatgagg
gccagaggtcagggggcgtccccggccgccatgcagaaggcgcagcaggtttcccaaggg
cttgacgtgctaactggcaaagtggaaaatgctgctcgcaaactggaggccatgactaac
tccaagcaggcgatcgccaaaaggattgatgctgcacagaactggctggcagatcctaat
ggcggcccagagggagacgagaacatcaaggccctgctcactgaggccaaaaagatcgca
gacatgtgtgaggatcccaaagaaagagatgacattttgcgctctattggagagatcgcc
gccatgactgccaagctctctgatctcagaagacagggtaaaggtgacactcctgaggcc
agagctttggctaaacagatcgcaacagctctgcagaacctgcaatccaagaccaacaaa
gctgtggccaacagcagacctgcaaaggcagctgttcacttagaaggaaagattgagcag
gcgcagcgctggattgacaatccctccatggatgacagtggcgtcggccaggcagcaatc
cgcgggctggtggcagagggccgcaggctggccaacgctctgccaggcccatacaggcag
gagctgctgggtaaatgcgaacaggtggagcagctcatggcccagctggctgacctggcc
gcccgcggcgaaggggactccccccaggcacgtgctgtggctcagcagctccaggaggcc
ttgaaagacttgaaagggaagatgcaagaggcgatgactcaggaggtgtctgacatcttc
agtgacacaaccacccccatcaagttattgggagtggctgccaccgcccctctggacgcc
cccaacagagatgaggtctttgacgaaagggctgccaactttgagaaccacgccaataaa
cttggcaccacagcagagaaggctgctgctgtcggtactgccaacaagagcacagtggag
ggaatccaggctgccgtcaagtcgacgagagatttaacgccacaagtggtatctgctgct
cgtattctgctgagaaaccctggcaaccaagcagcatatgaacattttgaaaccatgaag
aatcagtggattgataatgtggaaaaaatgacaggtttggtggacgaggccatcgacacc
aaatctctgctcgatgcctcagaggaggccatcaagaaggacttggagaagtgccgtgtg
gccatggccaaccaccagcctcagatgctggtcgctggggccaccagcatcgcccgcaga
gccaaccgtatcctcctggtggcgaagcgagaggtggagaactctgaggatcctaaattc
agggaggtggtgaaggctgcatctgatgaactgagccagacaatttctcccatggtgatg
gacgctaaggcagtggctggaaatatccaggatccaagtcttcagaagggctttctggac
tcaggttataagattcttggtgctgtagctaaggtcagggaggccttccagccacaagag
ccagacttcccaccacctcctcctgaactggatcagcttaatcttaacgatgaggcagca
ccacccaagcctcctcttccagagggtgaggttcctccccccaggcctccccctccagag
gagaaagatgaggagttccctgagcagaaggccggggatatggtgaacgagcccatgatg
gtagctgccaggcagctccacgatgaggcccgcaaatggtccagcaaaggaaatgacatc
attggcgctgccaaacgaatggccttgctcatggccgagatgtcacgtctggtgcgtgga
ggcagcggaaacaaacgcgccctcatccagtgcgccaaggacatcgctaaggcttccgat
gaagtcacacggctggctaaggaggtggccaagcagtgtactgacaagcgtatccgaacc
aacctgctccaggtgtgtgaacgcattcccaccatcagcactcagctcaaaatcctgtcc
acagtcaaggccaccatgttgggtcgtaccaacatcagcgaagaggagtcagagcaggct
actgagatgttggtccacaatgctcagaacctgatgcagtctgtgaaggagacagtcagg
gaggccgaggcagcttccattaagatccggacagatgcaggtttcaccctccactgggtc
aggaagaccccctggtaccagtaa
DBGET
integrated database retrieval system
