Seriola lalandi dorsalis (Yellowtail amberjack): 111657211
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Entry
111657211 CDS
T06058
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
slal00535
]
111657211
Proteoglycans [BR:
slal00535
]
Extracellular matrix (ECM) proteoglycans
Others
111657211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
VWA_3
Motif
Other DBs
NCBI-GeneID:
111657211
NCBI-ProteinID:
XP_023265070
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
DQFVCHTEAIADIVILVDGSWSIGRINFRLVRMFLENLVNAFDVDIDKTRIGLAQYSGDP
RIEWHLNAFSTKDAVIDAVKNLPYKGGNTLTGLALTYVLENCFKPESGSRVGVPKIGILI
TDGKSQDDVIPPAESLRNAGVELFAIGVKNADENELRSIASEPDNTHVYNVADFNIMSSI
VEGLTRKVCEQVEQQDKDIKDKQIPEMIGTPLDLVTSEVTARSFRVSWSDAPGNVEKYRV
VYYPTQEGEPQEAVVDGSETSVVLQHLSSLTEYQLAVFAVYANEASEALRGSETTLALPT
VTGLQLFDVTHSTMRARWDSVDGVSGYMLLYTPLTDDGDLDEKEIKVSDAVTELELDGLI
PHTEYTVTVYAMYGEEASDPTTNQETTLPLSPPSNLQFSDITHNSAHISWDSAPSGVKGY
RIMWVKTDELVTEEVEVGPVSSYDLSELTSLMEYSVAIFALYDNGQSEPLNDGFTTTPVP
GPLNLRSSDVSTDSFEVSWDHSANDIVLYRLSWAPFTGGDTKEVVLSGSDNRYILNSLSP
STEYEVMLTAVFKDESESDTISVIETTLAKTTTIATTTVGRQAVRNLQLNDETTQSLEAS
WEMEDPHVESYRVSYAGLRGDHKEESVLVPGGQRRAVLQPLLSDTQYKVTVTPVYKDGQD
GISVSALGATSPLLSPGNLRVSEEWYSRFRVTWDPPQSPTEGYRIVYQPIYVPGPVLETT
VGEDVNSMLLLNLLSGTEYSVQVTASYPTGQSEPQLVNAKTMFLGVSGLSTYQVRSNSMC
VQWQPLLHATLYRVSIQSTLNSQRQEVSLGGGASRQCFYDLTPSSQYEISVHTQMQEMEG
PSVSITDMTLPAPTQAPTEPPTTEPPPTIPPAKEVCKEAKADLAFLVDGSWSIGDDNFMK
ITRFLYSTMGSLDLIGPDGTQVAIAQFSDDARTEFQLSSHGNKEALLEAIQRIRYKGGNT
KTGRAIKHVKESIFTPEAGARRGVPKVLVVLTDGRSQDDVNKVSKEMQMEDYIIFAIGFA
DADYGELVNIASKPSDRHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTMAGF
RMMEKFGLVEKEYSMIPGVSLEPGSFNSFPCYRLHRDALVSQPTKYLHPEGLPSDYTISM
MLRLLPETPQEPFALWEILKKDKEPLVGLILDNSGKTLTFFNYDYKGDFQTVTFEGTEIK
KIFHGSFHKLHVTISKTSVKVVLDCSVVGEKSISASGNITTDGVEVLGRMFRSRGPQDNS
APFQLQMFDIICSTSWASRDKCCELPALRVEEQCPPMPHACTCSQDSKGPPGPSGPPGGP
GIRGARGDRGEPGITGPQGPVGEIGPPGHPGPPGPQGPGGLSIQGPPGAAGEKGERGESG
PAGQVGVAGSPGSPGRDGPPGTRGLPGNSGPQGRQGPPGPVGTPGAPGAPGPGGPAGSQG
DQGLPGPAGSKGDKGERGDVQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPVQSAVSV
RTVPGPPGEPGRRGAPGPQGEQGPSGRPGFPGTSGQNGRPGERGLSGEKGERGNPGVGSQ
GPRGPSGPPGLPGEGRTGSQGPPGRPGNSGTAGRPGNPGATGPAGPPGYCDQNSCLGYNV
GVQPLPHGGYQPYNPPYNQLYNPAAVAYNNDQGGEDEEEEVGEEEQEPYYHRSYPPQYYP
QQPSQLAHGRHGYRSSPTQSEDVELRSPGVARRFSRDVVVMEESEEGGL
NT seq
5192 nt
NT seq
+upstream
nt +downstream
nt
tcgatcagtttgtgtgccacactgaagccatcgcagacatcgtcatcctggtggacggct
cctggagtatcggtcggatcaacttccgcctggtccgcatgttcctggaaaacctggtca
atgcctttgatgttgacatcgataagacaaggattggtctggctcagtacagtggtgatc
caaggatagagtggcatttaaatgctttctccactaaagatgcagtcattgatgctgtca
agaacctgccgtacaaaggaggaaacactctcacaggccttgccttgacttatgtcttgg
agaactgcttcaagcctgagtctggatcacgtgttggcgtgcccaagattgggattctaa
tcacggatgggaagtctcaggatgatgttataccacctgcagagagtctacgtaatgctg
gggttgagctgtttgctattggtgtgaagaatgctgatgagaatgagctgcgctccatcg
cctcagaaccagacaacactcatgtctacaatgtggccgacttcaacatcatgagctcca
tagtagagggtctgaccagaaaagtgtgtgaacaagtggagcagcaagataaagacatca
aggacaagcagataccagagatgatcggaacgccacttgacctggtgacgtcagaggtca
cagcccggagcttcagggtctcatggagcgacgcccctggaaatgttgagaaatacagag
tggtttattatcccactcaggaaggagaaccacaggaggctgtagtggacggcagtgaaa
cttcagtggtgttgcagcatctcagctctctcactgagtaccagctggctgtgtttgctg
tgtatgcaaacgaggcaagtgaagctctcagaggatcagaaacaacccttgccctcccca
ctgtgactggcctgcagctgtttgatgtgactcacagcaccatgcgagcaagatgggaca
gcgtggacggcgtctctggctacatgctgctttacacacctcttacagatgacggagact
tggacgagaaggagatcaaggtttcagatgcagtgacagagctggagctggatgggttga
tccctcacactgaatacaccgtcactgtttatgccatgtatggagaggaagccagtgacc
ctactacaaaccaggaaactacattaccattgagtcctcccagtaacctccagttctctg
acatcacccataactccgcccacatcagctgggactccgcacccagcggagtaaaaggtt
accgaatcatgtgggtcaagacagacgaactagtcacagaggaggtggaggtcggtccag
tgagctcttatgacctcagcgagttgacatctctgatggagtactcagtggccatcttcg
ccctgtatgacaacggccagtcagagccgctcaacgatggattcactaccactccagttc
ctggtcctctgaatctacgctccagtgatgtcagcacagacagctttgaggtcagctggg
atcactcagccaatgacatcgtcctctacagactctcctgggcaccgttcacaggtggcg
acaccaaagaggtggtcttgagtggaagtgataacagatacatcctgaacagtctgagtc
cgtctaccgagtatgaagtgatgttgacggctgtgttcaaagatgaatcagagagtgaca
ccatctctgttatagagaccacattggccaagacaacaacgattgctacaaccacagtag
gacgtcaggctgtgagaaaccttcagctgaacgacgagaccacccagagcttagaggcat
catgggagatggaagacccccatgtggagagctacagggtctcctatgctggcctcaggg
gtgaccacaaagaggagtctgtgttagttccaggtggtcagaggagagctgtgcttcagc
ctttactatcagacacccagtacaaagtgacagtcacgccagtgtacaaggacggacagg
acggcatcagtgtctctgccctgggagccacatcgcccctcttgtctcctggaaatctcc
gcgtgtcagaggagtggtacagccggttcagggtcacctgggatccacctcagtctccaa
cagagggttacaggatcgtctaccagcccatttatgttccaggaccagttttggagacaa
ctgtgggtgaagatgtgaactccatgctccttctgaatcttctgagtgggacagaataca
gtgttcaagtgacagcttcctaccctacaggacaaagtgaaccacaactcgtgaatgcta
aaacaatgttcctcggcgtctctggcttgtcaacctaccaggtgcgttccaacagcatgt
gtgtccagtggcagcctcttctacacgccacgttatacagagtgtccatacagtctacac
tcaatagtcaaagacaggaagtgagcctgggaggtggtgcttcccgacagtgcttctatg
acctcactcccagcagccaatacgagatcagtgtccatacgcagatgcaagaaatggagg
gaccttcggtctccatcactgacatgacgttgccagcacccactcaagccccgactgaac
cacccaccacagagcccccccctaccatcccgcccgctaaggaagtgtgcaaggaggcca
aggctgacctggcgttcctggtcgatggctcctggtccatcggagacgacaatttcatga
agatcacacgtttcctttacagcaccatgggatcactggatctgattggaccagatggca
ctcaggtggccattgctcagttcagcgacgatgctcggacagaattccagctgagttccc
atggcaacaaggaagcactgctggaggctattcagaggatcagatacaaaggaggaaaca
ccaagacaggtcgggccatcaaacatgtgaaagagtccattttcactccagaggccggag
ccagacggggcgtccctaaggtcctggttgtcctgactgatgggcgttcgcaagatgatg
tcaacaaagtgtccaaggagatgcagatggaggactatatcatctttgcgattggctttg
cggacgcggattacggagagctggtgaatatcgccagcaagcccagtgatagacacgtct
tttttgtggacgatttggatgctgtaaagaaaatagaagaacagctcattacctttgtct
gcgaggccgccactgccacttgtccgtctgttttgatgagtggtaacaccatggcaggtt
tccgtatgatggagaagtttggcctggtagagaaggagtacagcatgataccaggagttt
ctctggagccggggtcgttcaacagcttcccctgttacaggttacaccgtgacgccttgg
tgtcacagcccaccaagtaccttcaccctgaaggtttaccctctgactacaccatttcaa
tgatgctccgcctactcccggagaccccgcaggagccctttgcattgtgggaaatcctca
agaaagacaaagagccattggtgggactaatcctggacaactctggaaagaccttgacgt
tcttcaactatgactacaaaggagacttccagactgtgacatttgaaggaacagaaatca
aaaagattttccatgggagcttccacaagctccatgtaaccatcagtaagacgtctgtga
aggtggtgttagattgttctgtggttggggagaaatccatcagtgcatctggtaacatca
ccaccgatggagtggaggtcctcggaaggatgtttcggtccagaggtccacaggacaact
ctgctccgttccagctccagatgtttgacatcatctgcagtacatcctgggcgagcagag
ataagtgttgtgaactgccagcattgagagttgaggagcagtgccctcccatgcctcatg
cctgcacctgctcccaggacagcaaaggacccccaggaccctctggaccccctggtggtc
caggcataaggggagccagaggagacagaggagagccaggaataacgggacctcaagggc
cagtgggagagattggcccacctggacacccaggaccgcctggtcctcagggacccggtg
gactctccattcaggggcccccgggcgctgctggagaaaagggagagagaggagagagcg
gtccagccggacaagtgggtgttgctggaagccctggctcacctggtagagacggccccc
caggaacaaggggtttgccgggaaatagcggaccacagggacgacaaggacctcctggac
ccgttggaaccccaggtgcacctggagctccaggaccaggtgggccagcagggtcccaag
gagatcaagggcttcctggccctgctggtagcaaaggggataagggagaaagaggtgatg
tgcaatcccaagctgctgttcgagccatcgcacggcaagtgtgtgaacaactcatccaga
gccacttgtctcgttataactctatactgaaccagatccccgtccagtctgcggtgtcgg
tccgaacagtacccggaccaccaggggagccgggaaggagaggtgccccaggacctcagg
gagagcaaggtccgtccggcagacccggcttccctggtaccagtggccagaacggaagac
ctggggagagaggtctgtcaggagagaagggagagagggggaatccaggggttgggagtc
agggacctcgaggaccatccggacctccaggcctgccaggtgaaggacggacaggcagcc
agggcccacctggtcggcctggtaactcggggacagcggggaggccggggaatccaggtg
ccactggaccggctggcccaccaggatactgtgaccagaactcctgcctgggatacaatg
ttggagtccaacccctgcctcatggcgggtaccagccctacaaccccccctacaaccagc
tgtacaaccctgctgcagtggcttacaacaacgaccaaggaggagaagacgaggaggagg
aggtgggagaggaagagcaggagccctattaccatcgtagttacccccctcagtactacc
cccaacagccctcccaattggcccacggtcgccatggttaccgctcgagccctacccagt
ctgaggatgtggagctgaggtcgccgggcgtcgccaggaggttttcccgtgatgttgtcg
tcatggaggagagtgaggagggaggactttag
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integrated database retrieval system
