Seriola lalandi dorsalis (Yellowtail amberjack): 111657344
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Entry
111657344 CDS
T06058
Symbol
ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
slal03041
]
111657344 (ddx27)
03009 Ribosome biogenesis [BR:
slal03009
]
111657344 (ddx27)
Enzymes [BR:
slal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111657344 (ddx27)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111657344 (ddx27)
Ribosome biogenesis [BR:
slal03009
]
Eukaryotic type
Pre-60S particles
Helicases
111657344 (ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
Cas3-like_C_2
FerA
PRK
Zip
Motif
Other DBs
NCBI-GeneID:
111657344
NCBI-ProteinID:
XP_023265248
Ensembl:
ENSSLDG00000004114
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MLEELGLIGTIRDEDQSPEEPDSESDQEEERIILNRKKKLKNFGSKDFNTDFQFGERDVL
NHDDDWVMADVMKQLKKKRSVTTLDQKIEKIRKKRKAEEKSAQSGAAEDTAGKNEEEEEE
EEEDDDEEQDVKPAAGEADEGDDEEEEDDEDDEDEFDSSDEEILTKSDTLREKERRGKKR
KAGEEAPEAFYEDASQYDDQLTFDDMNLSRPILKAITAVGFKQPTPIQKACVPVGLLGRD
LCACAATGTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLAQFTS
ITTCLAVGGLDLKSQEVALRAGPDVLIATPGRLIDHLHNTPSFELTQIEILILDEADRML
DEYFEEQMKEIIRLCSYNRQTMLFSATMTNEVKDLAAVSLKQPIRIFVNSNTDVAPFLRQ
EFVRIRPNREGDREAVVAALLTRTFQDHVMCFTQTRKQAHRLHILLGLMGLKVGELHGEL
SQSQRLENLRRFKDEQIDILVATDVAARGLDIDGVKTVINFTMPSTVKHYVHRVGRTARA
GRSGRSVSLVGESERKTLKEVVKSAKNSVKARVLPPDVILKFRDLISKLEKDVYAVVKLE
REERELAASEAKLSVAQKRLDSSAASSETQRVWFQTQQERKQSRASKALQEFDLALRGKK
KREKFLKDGKKKELTSEERSQFEILKAQMFAERAAKRERRPKRARAMPEEETQTKAANQK
ARKGGKKSVFDKELTNTSSKALKHYRAGPSFADRKRLGLDRKRPGGSKFKKKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagaactgggtctgatcgggacgatccgggacgaggaccagagtccggaggaa
cccgacagcgagtccgaccaggaggaggagcggatcatcctgaacaggaagaagaagctc
aagaatttcgggtcgaaagattttaacacagactttcagtttggagagagggacgtcctg
aaccatgatgacgactgggttatggccgatgtcatgaagcagcttaaaaagaagagatct
gtgacgactctggaccagaaaatagagaaaataaggaagaaaaggaaagctgaggagaaa
tcagctcagagcggcgctgctgaagatactgcagggaagaacgaggaggaggaggaggaa
gaagaagaagatgatgatgaagaacaggatgtaaagcctgctgcaggagaagctgatgaa
ggtgatgatgaggaggaggaggacgacgaggacgatgaagatgagtttgactcgagtgac
gaggagattcttaccaaatcagacaccctgagagagaaagaacgacgtggaaagaaaagg
aaggcgggagaagaggctccagaggcattctatgaagacgcatctcagtacgatgatcag
ctgacctttgatgacatgaacctgtccagacccattctgaaggccatcacagctgtgggc
ttcaagcagccaacacccatccagaaggcctgtgttcctgttggcctgctgggcagagac
ctctgcgcctgcgctgctactgggacaggaaagacagcagccttcatgctgccggtgttg
gagcgtttagtttataagcccaggacttcccaggtgacccgggtcttggttctagttcca
accagagagttggggatccaggttcactctgtggcccgtcaactcgcccagttcacctcc
atcaccacctgcctggctgttggtgggttggacctgaagtctcaggaggtggctttgagg
gcggggccagacgtcctgatcgctacacctggtcgtctgattgatcaccttcacaacaca
ccgagcttcgagctcactcagattgagatcctgatcctggacgaggctgacaggatgttg
gacgagtattttgaggagcagatgaaggagatcatcaggttgtgttcctacaacagacag
accatgttgttctccgccaccatgacaaacgaggtgaaggacctggcagccgtttcattg
aagcagccaatcaggatctttgttaacagcaacactgacgtggctccgttcctgcgacag
gagtttgtcagaatccgaccgaacagagaaggagacagggaggctgtggtggctgctctg
ctgactcgaacgttccaggatcacgtgatgtgtttcactcagacgaggaaacaggctcac
cgactgcacatcctgctgggcctgatgggactgaaggtcggagaactgcacggagaactg
agccagagccagagactggagaacctcaggcgttttaaagatgaacagattgatatcttg
gtggcgacagatgtagcagccagaggtctggacatcgatggagtcaaaacggtcataaac
ttcaccatgccatccacagtcaaacactacgtccaccgagtcggccgcacagcaagagcc
ggtcgttccggacgttcagtgtctctggtcggagagtctgagaggaagacgctgaaggag
gtggtgaagtctgccaagaacagtgtgaaggctcgagtcctgccgccagatgtcatcctg
aagttcagagatctgatttccaaactggagaaggatgtttacgctgtggtgaagctggag
agagaggaaagagagctggctgcgtctgaggccaagttgagcgtggctcagaagcgtctt
gatagctctgctgcttcaagtgaaacacagagagtttggtttcaaactcaacaagagagg
aaacagagtcgtgcgtcgaaggctctgcaggagtttgatctcgctctcagaggcaagaag
aagagagaaaagttcttgaaggacggcaagaagaaggagctgacgtctgaggagcgctct
cagtttgagatcttgaaggctcagatgtttgctgaacgggcggccaagagagagagacga
ccaaagagagcgagagcaatgccagaggaagagacgcagactaaagcagccaatcagaaa
gcaagaaaaggaggcaagaaatcagtgtttgacaaagagctgaccaacaccagcagcaag
gccctgaaacactatagagcagggccatcctttgctgacaggaagcggctcggtttggat
agaaagcgtcctggtggctccaagttcaagaagaagaagtga
DBGET
integrated database retrieval system
