Seriola lalandi dorsalis (Yellowtail amberjack): 111657349
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Entry
111657349 CDS
T06058
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
slal04990
]
111657349
Domain-containing proteins not elsewhere classified [BR:
slal04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
111657349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
111657349
NCBI-ProteinID:
XP_023265253
Ensembl:
ENSSLDG00000005679
UniProt:
A0A3B4WSE7
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MASPAAGRDVPNAPTRDESLEPSHPEPACQEAQKWIEAVTGKSFGDKDFRSALENGILLC
ELLSAIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLRGSQLFDPGDLQDTSIRANLK
DSDCNRKLKNVLNTVFWLGKAASGCASYTGPNLNLKEFEGLLAQMKMESDEGGDSPQKRS
VRDSGYDCWDSERSESLSPPRHTRDNSLDSLDSFGSRSQHSPSPDVVNRGNSDGRGSDSE
ADAPSRKPDVRKDDMLARRTASSESRSSIPFNQFLPNRTNASSYIPTPRRKPHAEEGEQR
SCPPEQGKRTGLHNKTPKTVTWAFENNGEKPKQEEEKVTQEVLEQRKLQKLEKAGIKVLP
AAVRYSSPPTMEEQEVRSPSPNIILRCENDFLSSQKSAWDSSSDGEEEAEVRKVPDVRRD
DLASRRAHRGPVAPNVHQFLPPPVCSNKDRERWEGIRRASQQTLQKTEISEKETFPDIIT
RRDNPFLNSAPRHKEEEEEDEEEAGEEGRVKAMPNKQKDDLARRRAQSRPLPHRDGPMSF
VSASMSQADMKKWERLKMTEPSEASPAPVCQACLEKNYGSPFSGSAKAGRSQSKVVTFGG
VTEIEQPIDTVTSNEGEETELLRRLLSKATVAMPTIGLGSQLSERERSQVDGADLSQTLP
PSADLPPWTPEVALTPAELDARLAQYEKRTEEDDEEEQERIPDLQKDDMMARRTGVFHKQ
STATTVTYNRFLPLPGSKRCTQEEDTTDAAPRNKKEVQTDRNKKLNVRVEQQQPRVHMEA
PQPQPDATVIRSTSHSECEYEDDEDEYDENEPMPDVEKDDMMARRTGSFQKPVAVRTNQS
FNQFLPVPGSVKYNISPVSAMKQLHSRPKFAEKMACESSIVTVAAEPQAPPPAAPTSPKC
AELRERQEEEDGKQEGDMTVPNTSVTDVTEPCPSLTPPPSPAAARVCKVEAELEKQSVED
IIEEREEERKRDVDEQPRKKPFWLEDDDLPPIMMSRRVAFMSEDTESVSMSDILNEEEVG
HLPPLSQSRYERMHEQYNSFQEDEDHWQNDLARWKNRRRSASQELIKKEEERKRMEKRMK
QEGSDGNKRKSIKTYKEIVEEKERREAELCEAYRNAATPEEAAMVLQRYALRFTISDATL
DSLKLPRSTSKPKSDLNRVDKEHKHSSPIHDSSEPLHKPEPAAITEPKRSKPEEMERETT
VQQESQVSPVNSPPTTVTSSENIPPQSLELDEPQSKPTESPTTYQKQPITGNAQPQTEHT
ASQIAHVQPHTTQPPHTLPSPPSVTSRPVPLLAAKPYCQPRSTPSGHKPVKMDGLVRVNG
EVTEDLPVSTTPAPPQLLPQEIKDVTPKQTDKDITPKQTDKDITPKQTDKDITSKQTDKD
ITPKQTDKDITSKQTDEDITPKQTDKDITSKQTEKDVPPEAMVKRQETTEHPPPLQTENS
TLSSGSAISSLIGGRNCIITTTIVTELTQTLVEPHPSDIQSNGQVNGTTGLFGTPVQEKK
AQSAPSPSSMQEYSPTVTEGLEESSVTIETPMLNLAKRVNHWVWDPNEERKRQERWQQEQ
ERLLQEQYQREQEKLKKEWEKAQLEVEEEERKHNEEERRILEETVTPLNPTSLLNQQSGH
TDTTSSAPESNKTEQTDVALQKNSQSISTGNEDQHESKLHFFQDSVCDGESSKKQELWKT
ASLDRNPQLNQAHVVKRSGSHDVVTGKQQSSSSLPSPQPPSPSRCVSGKRLCSGCSQPLG
KGAAMIIDTLGLFFHIQCFKCGVCGGQLGDATAGTDVRIRNGHLSCHECYIATRGRGQPT
TL
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggctagccccgccgcaggtcgagatgtcccgaacgctccgacgcgggacgagtcgctg
gagccgagccatcccgaaccagcctgtcaggaagcacagaaatggatagaggctgtaact
gggaagagctttggagacaaggacttccgcagtgcactggagaacggcatcctgttatgc
gagctgctgagtgcaatcaaaccagggttggtcaagaagatcaacagactgcccaccccc
attgctgggctggacaacctgtcagtcttcctgcggggctgtgaggagttgggcctgagg
ggctcccagctgtttgaccccggggacttgcaggacacttctatacgagcaaacctcaag
gactccgactgcaaccgcaaactaaaaaatgtgctgaacacagtgttctggctggggaag
gctgccagcggctgcgcctcctacactggccctaatctcaacctcaaggagtttgaaggg
cttcttgctcaaatgaagatggagagtgatgaaggaggtgacagtccacagaaacgcagt
gttagagacagcggctatgactgctgggactctgagaggagtgagtctctttcccctcca
cgacacactcgtgacaactcccttgacagtctggactcttttggctcccgctcacagcac
agtccgtctccagatgtggtgaatcgtggcaacagtgacgggcgaggcagtgactcggag
gctgatgcccccagcaggaagccagatgtgcggaaggatgacatgttggccaggcggacc
gccagcagtgaatccagaagctccatccccttcaaccagtttcttcctaaccggaccaac
gccagctcctacatccccactccacggcgaaaaccacatgcagaggagggagagcagcgg
agttgccctccagagcagggcaaaagaactggactgcacaacaaaactcccaagactgtc
acttgggcctttgagaacaatggggaaaaaccaaaacaggaagaggagaaggtgacccag
gaagtgttggagcagaggaagctgcagaagttggagaaggcaggaattaaagttttacct
gctgctgttcgctacagcagccctcccacgatggaggaacaggaagtaaggtcaccgtct
ccaaacatcatccttcgttgtgaaaacgactttttgagctctcagaaatctgcctgggat
tcctcctctgacggggaggaggaagcagaggtgcggaaagtcccagatgttcgtagagat
gacctagcgtccagacgagctcatcgcggcccggttgctcccaatgtgcaccagttcctc
cctccacccgtatgtagcaacaaggaccgagagcggtgggagggcattagacgggcctca
cagcaaacactgcagaagacggagatcagtgagaaggaaacattccctgacatcattaca
cgcagagacaacccgttcctaaactctgcccctcgccacaaggaagaggaggaggaggat
gaggaggaagcaggagaagagggaagggtaaaggcgatgccaaacaagcagaaggatgac
ctggctcgtaggcgggcacagagtaggcccctccctcacagggatggaccaatgagcttt
gtttctgcctccatgagccaggcagatatgaagaagtgggagagactcaagatgactgaa
cccagtgaggctagcccggcacctgtgtgtcaggcttgtctggagaaaaattatggaagt
cctttcagcggatcagcaaaggctggacgaagtcaaagcaaagttgtgacctttgggggc
gtgactgagattgagcagccaatagacacagtcacatcaaatgaaggggaggagacggag
ttgctaagacgactcctttccaaggcaactgtagccatgcctacaattggcctgggctcc
cagctttcagagcgggaacgcagccaggttgatggagctgacctcagtcaaactctccct
ccttctgctgacctcccaccctggacccctgaggttgctctgactcctgctgagctggat
gctcgtttggctcagtacgaaaagagaacagaggaggacgatgaggaggaacaggaaagg
atcccagatctgcagaaagacgatatgatggcaaggaggacaggtgttttccataaacaa
agcactgctaccacagtgacttacaaccgtttcctgcctctgcctggctccaaacgctgc
acacaagaggaggacaccactgatgctgctccgcggaacaaaaaggaagtgcagaccgac
agaaacaagaaactgaatgtcagagtggagcaacagcaacccagagttcacatggaagca
cctcaaccgcagcctgacgcaacggtgatccgatcaacatctcacagcgaatgtgaatat
gaggatgatgaggatgagtatgatgaaaatgagcctatgccggacgtggagaaggatgat
atgatggcacgaaggaccgggtcttttcaaaaacctgttgcagtcagaacaaatcagtcc
tttaatcagttcctgcctgtacctggatcagttaaatataacatcagcccagtgtctgcg
atgaagcagctacacagcagacctaagttcgcagagaagatggcttgtgaaagcagcatc
gttaccgtagcagcagaacctcaggccccgcctcctgcagccccaaccagccccaagtgt
gcagagctgagggagaggcaggaggaggaggatggaaagcaagagggagacatgacagtc
cctaacacctctgtcacagatgtgactgaaccttgtccatccctcacccctccacccagt
cctgctgctgcccgggtctgtaaagtggaggcagagttggaaaagcagagtgtggaggac
ataattgaggaaagagaggaagagagaaaaagggatgtggatgagcaaccacgaaagaaa
ccgttctggctggaggacgatgatctacctcccataatgatgagccggcgagttgctttt
atgtctgaggacacagagagtgtgagtatgagtgacatacttaacgaggaagaggtggga
cacttacctccactgagccagtcacgatatgagcgcatgcatgaacagtacaacagcttt
caggaagatgaggaccactggcaaaatgacttggcacgctggaagaatcgccgtcgcagc
gcgtcacaggagctgatcaagaaagaggaagagaggaagaggatggaaaaaaggatgaag
caggagggaagtgacggcaacaagaggaaaagcattaagacatacaaagagattgtggag
gagaaggagcgtagagaagcagagttgtgtgaagcttacaggaatgcagcgacaccagag
gaggcagccatggttttacagcgttacgctctccgcttcaccatcagcgacgcaacactt
gacagcctaaaactacccagatccacctcaaaacccaaatcagacctaaatcgggtggac
aaagagcacaaacactcatcacctattcatgactcatcagaacctctgcacaaaccagag
ccagctgctataacagaaccgaagcgctcaaaacctgaggagatggagagagagaccact
gttcaacaagagtcacaagtttccccagtcaacagtccccccaccacagtcacaagctca
gaaaatataccacctcagtcattagaacttgatgaacctcaatccaaacccacagagtct
ccaaccacatatcagaaacaaccgattacaggaaatgcacagcctcagaccgagcacaca
gcgtctcagattgcacatgtgcagcctcacaccacacagccaccacacacactcccttcc
cctccatctgtaacctccagacccgtccccctcctggcagccaagccctactgccagccc
aggagcacaccgtctggacacaaacctgtcaagatggatggattggtgcgagtgaatgga
gaggtgacagaggatttacctgtttccactacacctgccccccctcagctcttgccacag
gagattaaagacgtgacccccaaacagacggacaaagacattacccccaaacagacggac
aaagacattacccccaaacagacggacaaagacattacctccaaacagacggacaaagac
attacccccaaacagacggacaaagacattacctccaaacagacggacgaagacattacc
cccaaacagacggacaaagacattacctccaaacagacggagaaagatgttccccctgag
gcgatggtgaaacggcaggagacgacagagcatccaccacctctgcagacagagaactca
accctctcctcaggctctgccatcagctccttgattggaggccgaaactgtatcatcaca
acaactattgttacagagctcacgcagactctggtggagcctcatccctcggatatccaa
agcaatggacaggtcaatggtaccacaggtttgtttgggacaccagtgcaggaaaaaaag
gctcagtcggctccatcacccagcagcatgcaagaatattctcccactgtcacagagggc
cttgaggagagcagtgtgactattgagacccccatgttgaacttggctaaacgtgttaat
cactgggtctgggaccccaatgaggagcgtaaacgccaggaaaggtggcaacaggagcag
gagcgcctcctacaggagcaataccagagagaacaggagaagctgaagaaggagtgggaa
aaagcacagctagaggtggaggaggaggagcgaaagcacaatgaagaggagagacggatt
ctggaggagactgtaacacccctcaatcccaccagtttgttgaaccagcagtctggtcac
acagacacgacttcatcagctccagaaagcaacaagacagagcagacagatgttgccctg
cagaaaaacagccaaagcatctccacaggaaacgaagatcagcatgaatcaaagctgcat
tttttccaggattctgtgtgtgatggtgaatcttcaaagaaacaggaactgtggaagaca
gcatctttagaccgcaaccctcaactaaaccaggcacatgttgttaaaaggtctggatcg
catgatgttgtgacaggaaaacagcagtcctcctcctccttaccctcaccacagcctcct
tcacccagcaggtgtgttagtgggaagagactgtgttctggttgttctcagcctctggga
aaaggagctgccatgatcattgatacactgggactgtttttccacatacagtgtttcaag
tgtggagtgtgtggcgggcagctgggtgacgccactgcagggactgacgtaaggattcgt
aatggacatctgagctgtcatgagtgctacattgcaactcggggcaggggacagcccacc
acactatga
DBGET
integrated database retrieval system
