Seriola lalandi dorsalis (Yellowtail amberjack): 111657498
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Entry
111657498 CDS
T06058
Name
(RefSeq) protein SCAF8-like
KO
K13191
RNA-binding protein 16
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111657498
03041 Spliceosome [BR:
slal03041
]
111657498
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111657498
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111657498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111657498
NCBI-ProteinID:
XP_023265455
LinkDB
All DBs
Position
Unknown
AA seq
1429 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIPPPSVTPVMPSSAAPVNNTTPGTPATPATPANLVQGLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANSLNPLEQRVSSFNKKLLGPFDFSNDSERGEESKKDTSSSQLPMVSEPINSSLF
HQLAEQLQQQNLEQFQKQLLEHQQHQQKAMSIEGQDSIFGQENSVATAQGSSQPQLPEPE
NKLDDSIDNQQQDMDLDEGPDGMEEEIFEAEEKKTVSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSYKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWE
AAKNAEPAKEVASQPVSAETTAVSNTQTETYNQQVTMMPVQLPVAQAVPSAVGLVPPTFP
VTMGIPPPGYGPPPPFIRASFNASQPPPGFMQTAGMASATTSLVQPSVASNQEAVKESPF
SAMIPPTSTIPGSFMPSAIPGAGVFNPVGVQTQATNEKTAQSAEGLDAAAELTLQGMQNA
VRSGMGLLGMHPTASLTHPLHQSGLAGQRMPGLLPLDVRPNLLQPGAAARFPLLMQQGPA
QQAAGLLDSSLQARARAPFSQLDPFNRAPNLTNESLSKTEDESSSGADEGKDQDYRFPPM
EKQSTGLLRTPPPEHREPLGAGGGGAGGGGGGRPPLLQTPGTARTSLVGRLQALAGFTPD
NRWNQARGDFDERDGMRGGPQAPGAPKGFQEERPTPGQNFPNRFDSRPGTAGGAGVPGNA
GAAGGPQAWNRSGGATAPFDSELHQDLDDRRRPWDRQRDRDERDFDFRREMNGNRHSRER
ERERERDRERGRDRNREHERERDRDKERDRERERERERGSWTPLLPLPTPLLPTPPLNPN
LTLNQGKLLAPLKLNPQMQQRFQSPLLPQAQAKPSPMGLNQQLPQVQIKSPPPSQSQAAM
PEPQSETSGPSETPQALSPLAAQSPDASPNSKSQSPLTEVPTQAESSPQSETPPQTESQS
QPTAESPSKTTASPDTASPDTASPDTASPDTASPDTETPIQALPLVEASSQDSPVAFTLA
ASPPGETAHSLEEQESPQKDEEESQERASSPHPQWVNGPGMDSSNVAEPTPEASPEPTAD
PSSDSMHPESEPEQEQLASPKDVDNEQSEPMEEAASQPVVDTVTDTEGT
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcatttaacaatgagctgtactcattgaatgagtacaagccgccc
atctccaaggccaagatgactcagatcaccaagtctggaatcaaagctataaaattctac
aaacatgttgtccagagtgtagaaaagtttatccaaaagtgcaaaccagaatacaaggtt
ccagggctgtacgtcatcgactcaattgttagacagtcacgacaccagtttggcacggag
aaggatgtttttgcccctcgcttcagcaagaatatcatcgctacgttccagcacctctac
cgctgcccttcagatgataagagtaagattgtacgggtcctcaacctgtggcaaaagaat
gctgtcttcaagagtgacatcatccagcctctgttggacatggcagcagggattccacct
cctagtgtcacccctgtcatgcccagcagtgctgccccggtcaataacactacacctggc
actccagccaccccggccaccccagccaacttagtccagggtctgcctgactgggcttcc
cagatcaccaacacagacactgtggctgctgtggcacagatcctacagagtccccaagga
caacagctgcagcagctggtacagagtctccagatgcagcagcagaagccccagccatcc
ctgctgcaggccttggatgctggcctagtggtgcagttgcaagctctgacggcacaactc
acagcggctgctactgccaacagcctcaaccctctggagcagagggtctcttcttttaat
aagaaacttttgggtccgtttgacttcagcaatgattctgaacgcggtgaagaatctaaa
aaggacacttcgtcatctcaactgcctatggtgtctgagcccatcaacagctccctcttc
catcagttagctgagcagctacaacagcagaacctggagcagtttcaaaagcagctgcta
gagcaccagcagcaccaacagaaggccatgagcatagaagggcaggattcaatctttggc
caagagaactctgttgcgactgctcaaggcagcagccagccacagcttcctgagccagag
aacaagttggatgactccatagacaaccaacagcaggacatggatctggacgagggccca
gatggaatggaggaggagatctttgaggcggaggagaagaagactgttagtacacgctcc
cgaacacgctcaagatcacgctctaggtctcccaagaggaggcggtccaggtcccggtct
ggctcacggaaacgcaaacaccgcaaacgttcccgctcacgatccagagaccgcaagagg
aagtcatcacggtcttactcaagtgaaagacgtgcccgagagcgagagaaagagcggcag
aagaaaggactgcctcccatacgatccaagactctgagtgtgtgcagcacaactctgtgg
gtgggccaggtggacaaaaaggctactcagcaagacctcaccaacttgtttgaagaattt
ggccagattgagtctatcaatatgatccctcctagaggctgtgcctacatctgtatggtc
catagacaggatgcataccgcgcccgccagaagctcagcaccggctcctataagattggc
tcaaaggtcatcaagattgcatgggctctgaacaagggcgtaaagcaggagtacaagcag
ttttgggatgtggacttgggtgtcacctacataccctgggagaaggtgaagctggatgat
ctggatggctttgctgaaggaggaatcattgaccaggagaccgtcaatgatgagtgggaa
gcagccaagaatgctgagccagcgaaggaagttgcaagtcaaccagtaagcgcagagact
acagcagtatctaacacccagactgagacctacaaccagcaggttaccatgatgcctgta
cagctaccagttgcccaggccgttcccagtgcagtaggtttggtgccacccaccttccct
gttaccatgggcataccccctccaggttacgggccgccaccacccttcataagggctagc
ttcaatgcctcacagcctccaccaggttttatgcagacagcaggaatggcctcagcaact
acttctctagtgcagccttcagtggcctccaaccaagaagctgtcaaggaatcaccattc
agcgctatgatccctccaaccagcaccatccctggcagcttcatgccctcagccatcccc
ggagccggtgtgttcaaccctgtgggagtccaaactcaagccaccaatgagaaaacagct
cagtctgcagagggattggatgctgctgcagagctcacactgcaaggcatgcagaatgct
gtccgcagtgggatgggtctccttggcatgcaccctacagcctccctcacccacccgctg
catcagtctggtctggctgggcagagaatgcctggcttgttgcctctagatgtgcgacct
aacctccttcagcctggggctgcagcccgtttcccactcctcatgcagcagggccctgcc
cagcaggctgctggcctcctcgacagttctctacaggcccgtgccagagctcctttctct
caactggaccccttcaacagggccccgaaccttaccaatgaaagtttatccaagacagaa
gatgagtcttcctctggtgctgatgaaggcaaagaccaggactatcgcttccccccaatg
gaaaagcagagcacaggcctgctgaggaccccgccaccagagcacagggagccccttgga
gctggtggtggaggagcaggaggaggtggagggggcaggcctcccttgctccagacccca
gggacagccagaaccagcctagtgggacgtctgcaggctcttgcaggcttcactcctgat
aaccgctggaaccaggccagaggagactttgatgaacgagatggcatgagaggaggccca
caggctcctggcgctccaaaaggcttccaggaggagcgccccacacctgggcagaacttc
cccaaccgctttgacagccgtcctgggacagcaggaggagcaggcgttcctggaaatgct
ggtgctgctggggggccacaggcctggaaccgaagtggtggtgccacagctccttttgat
agtgaattacatcaagacctagatgaccgaagacgaccatgggacagacaaagagacaga
gacgaaagagattttgacttcaggagggagatgaatggtaaccgtcacagccgtgagagg
gagcgcgagagggagagagacagggagcggggccgagatcgcaacagggagcatgaacgc
gagagagaccgtgacaaagagagagatcgcgagagggaacgtgaacgtgaacgtgggagc
tggacacctcttctccctctacctacacctctgcttccaactccacctcttaatcccaac
ctgaccctgaaccaaggcaaactgcttgcaccactcaaattgaacccccaaatgcagcaa
cgatttcagtccccactcctgcctcaagctcaggccaaaccttcccccatgggtctgaac
caacagctgcctcaggtgcagataaagtctccacctccatcccagagccaagcagctatg
cctgagccccagtcagaaacctcaggtccatctgaaaccccccaggcgctatcgccactg
gctgcccagtcacctgacgcatcacctaatagcaagagtcagagcccgttgactgaggtt
cccacccaggccgagtcatcaccacaatcagaaacccctccacaaacagaatcacaatcc
cagcccacagccgaatccccatccaagaccaccgcttctccagacaccgcttctccagac
actgcttctccagacactgcttctccagacactgcttctccagacactgagaccccaatc
caagccttacctttggttgaggcgtcatcccaggactcacctgtggccttcacactagct
gccagcccccctggagagacagctcactccctggaggagcaggaaagtccacagaaggat
gaggaggagtcacaagagagagcctcctcaccccacccccagtgggtcaacggacctggg
atggacagtagcaacgtggctgaacccacacctgaggcctctcctgagcccactgcagac
ccttcctctgactcaatgcaccctgaaagtgaaccagagcaggagcagcttgcctctcct
aaggacgtagacaatgaacagagtgagcccatggaggaagctgcgagtcagccagtggta
gacactgtcacagacactgaggggacataa
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integrated database retrieval system
