Seriola lalandi dorsalis (Yellowtail amberjack): 111657805
Help
Entry
111657805 CDS
T06058
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111657805
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111657805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
111657805
NCBI-ProteinID:
XP_023265888
Ensembl:
ENSSLDG00000023393
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MSQLYYRKSDNSSYRDRIPLRIVRAESELSALERAYLGAVEKGDYASVKQALEEAEIYFR
INIDCIDPLGRTALLIAIENENLEIIELLLSYNVYVGDALLHAIRKEVVGAVELLLNHKK
PRGEKQVPPILLDKQFSNFTPDITPIILAAHTNNYEIIKLLVQRGVSIPQPHSVRCNCME
CVSSSDVDGLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSRTCKQFAKDLLDQTRSSKELEIILNYRDDINPLLDENGNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKLITCIFIGLLFPLLSIFYLISPKSRYGLFIR
KPFIKFICHTASYLTFLFLLFLASQHIASAQQDFQGPAPTTVEWMILPWVLGFIWTEIKQ
MWDSGFQDYIDDWWNLMDFIMNSLYLATISLKIVAYAKYSGYKDRACWEMWHPTLVAEAL
FAIANIFSSLRLICLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETDEENKCKGIRCSEQNNAFSTLFETLQSLFWSVFGLISLYVTNVKPPHEFTEFVGSTM
FGTYNVISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPSPFNII
PSPKSVFYLTGWIKTYLFRRPSIKRHETFETLGRRAAENVRLNHEYQEVLRNLVKRYVAA
MIRDAKTAEGLTEENFKELKQDISSFRYEVLGMMKGKCHVASKVASTTLAYPGNPFKYSP
KFPADEPKRKLTMFDVITTTLQSGAANTTSSVCSNSLQSGSVVPSSAGKSQKELCDDDSD
SGSFQRQSRLPSQKCDEIYSLSEEEPSGSGGQNPEQLQTEKVIVEVERNIQEIERSCIEH
ITEVKNGPKKYKN
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattaccggaaaagtgacaactcctcatacagggaccgcatccctctg
cggatcgtgcgggccgaatccgagctctctgctctggaaagagcttacctgggggctgtt
gagaagggggactatgccagtgtgaaacaagccctggaggaggctgagatctatttcaga
atcaacatcgactgcatcgaccccctgggacgcacagccctgctcattgccattgaaaat
gagaatctggagatcattgagctgctgctcagttataatgtatatgtgggtgatgccctg
ctacatgccatccgtaaagaagtggtgggggctgtggagctgctgctcaaccacaagaag
ccacgaggagaaaaacaggtcccaccaattctgctggacaaacagttttcaaacttcacc
ccggacatcactccaatcatccttgcagcccataccaacaactatgagatcatcaaactg
cttgtgcagcgaggggtttccatacctcagccacattctgtacgctgcaactgcatggag
tgcgtgtccagctcagacgtggatggcctgcgtcactcacgctctcgtcttaacatctac
aaggccctctccagcccgtccctcatcgccctctccagcgaggatcctttcctcacggct
tttcagctcagttgggagctgaaggagctcagtacagtggaaaacgagttcaaatcagag
tatgaagagctctcccgtacttgtaaacaatttgcaaaagacctcttggaccagacccga
agctctaaagagttggaaataatcctcaattaccgtgatgacatcaatcctctgctggat
gagaatggaaatgatctggcacgactgaagctagctatcaaatattgccagaaagagttt
gtcgctcagcccaactgtcagcagctgctggcgtctcggtggtatgatgagttcccaggc
tggaggcggcgtcactgggcaggaaagctcatcacatgtatcttcattggcctcctcttt
ccactgttatctatcttctacctgatctctcccaagagccgctatggtttattcatccgt
aagcctttcatcaagttcatctgtcacactgcttcctacctgactttcctcttcctgctc
ttcctggcctcgcagcatatagcctctgcacaacaggactttcagggtccagcacccacc
actgtggaatggatgatcttgccttgggtgcttggctttatatggactgagatcaaacag
atgtgggatagtggtttccaagactacatagatgactggtggaacttaatggacttcata
atgaactccttgtatcttgcaaccatctctctgaagattgttgcctatgcaaagtacagt
gggtacaaagacagagcgtgctgggaaatgtggcacccaactttagtggcagaggcattg
ttcgctatcgccaacatcttcagctccttgcgtctcatctgccttttcactgccaactcc
catctgggacccttacagatctcactgggtcgcatgcttctggacatcctcaagttcctc
ttcatctactgtctagtgcttttagcctttgccaatggcctcaaccagctgtacttttat
tatgaaacagatgaggaaaataaatgcaagggcatccgctgtagtgagcaaaacaacgcc
ttctcaacgctgttcgagacactacagtcattattttggtctgtgtttggcctgatttcc
ctctatgtgaccaatgtgaaaccaccacatgaattcactgagtttgtgggctctaccatg
tttggcacatacaacgttatttccctggtagtgcttctgaacatgctaattgcaatgatg
aacaactcataccagcacatagctgatcatgcagatatagagtggaaatttgcaagaaca
aaattatggatgagctattttgaagaaggcgggactttgccatctccatttaatataata
cccagtccaaagtcagttttttatctcactggatggataaagacatatttgtttaggaga
ccaagcataaaacggcatgaaacctttgaaaccctggggagacgtgcagctgaaaatgta
agattaaaccatgagtaccaggaggttttgaggaaccttgtgaaacgttatgtggccgca
atgatcagagatgccaagacagcggaagggttgacagaagagaatttcaaggagcttaag
caggatatctccagcttccgctacgaagtcctgggaatgatgaagggtaaatgtcacgta
gcaagtaaagttgccagcaccaccttggcataccctggaaacccattcaaatattctccc
aaattccctgctgatgagcctaaacggaagctaaccatgtttgatgtgatcaccaccaca
ctacagagtggagctgccaacaccaccagctctgtttgctccaacagtctacaaagtggt
tcagttgttccatccagtgctggaaagagtcagaaggagctatgtgatgatgactcagat
tctgggtccttccagagacagagcagacttccctctcagaaatgtgatgaaatatattca
ttgtcagaggaagagccatcgggatctggtggacaaaacccagaacaacttcagactgag
aaagtaatagtagaagtggagaggaacattcaggagattgaacgttcttgcatagagcac
attacagaagtgaaaaatgggccaaaaaaatataaaaattaa
DBGET
integrated database retrieval system
