KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111657859
Entry
111657859         CDS       T06058                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slal03009]
    111657859 (rrp9)
Ribosome biogenesis [BR:slal03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    111657859 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_ACSF4 Beta-prop_NWD2_C WDR54 WD_LRWD1 WD40_like Ntox15 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 111657859
NCBI-ProteinID: XP_023265958
Ensembl: ENSSLDG00000002036
LinkDB
Position
Unknown
AA seq 486 aa
MSSSFFVKAKENPKLSKKGKNTPVTKRKGDGDSAAKSKVRANKPTSKYNEEISSDSETEG
PIVPRKRQSNEDNEYAETPQEKKLRLAKLYLEQLKDEEERKAEEDDFESDLIAGRLEEEV
LEQKGKLQRLIAKDLIPPDASEIRVLRGHKLPITCLVISPDDKCIFSAAKDCSIIKWDVE
SGKKLHTIHGGRKGTEDRHVGHTAHILCMAVSSDGKYLATGDMNKLIMIWEAATCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDSITGLDSLSRER
CVTAGGRDRTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLSTVKKAHGCHGDAELQQPHWVASVAALHNSDTVASGASGCSHNSQVQLWKCGQNYRGL
EPLFSIPVPGFVNSLKFSSAGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPPNPE
EAKMTE
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtcgtcgtctttttttgtaaaggcaaaagaaaaccccaaattatccaaaaaggggaaa
aatacaccagtgactaaacgaaagggtgatggggattctgctgccaagagcaaagtgagg
gcgaacaagcccacctccaaatacaacgaagagatttccagcgactctgagacagagggt
cccatagtgcccaggaagaggcagtccaatgaggataatgaatatgcagaaacgccacag
gagaagaaacttaggttagccaaactttaccttgaacagctaaaggacgaagaggaaaga
aaagcagaggaagacgactttgaaagtgacctgattgcaggaagacttgaagaagaagtg
ctcgaacagaaaggaaaactccagcgacttattgccaaagatctcataccaccagatgct
tcagagatccgggtgttaagaggacacaaacttccaattacctgtctggtcatctcccct
gatgacaagtgcatcttttctgctgcaaaagactgctccatcattaaatgggatgttgag
agtgggaagaaattgcatacaatacacggtggaaggaaaggtacagaggatcgccatgtt
ggacatacagcccacatcctgtgcatggccgtatcatcagatggaaaatacttggccacc
ggagacatgaacaaactgattatgatttgggaggcagcaacgtgtaaacatctttataaa
ttcacaggacacaaaggccctgtgtcgggtctttcattcaggaagggaactcatgatctc
tacagcgcctctcatgaccgctcaatcaaggtctggaatgtggacgagaatgcatatgtg
gaaactctctttgggcatcaggattctatcacaggactggacagtctgagccgtgagcgc
tgtgtgaccgcgggaggacgggatcgcaccgtgagggtgtggaagatagccgaggagtct
cagctcgtcttccacggccatgagggttcgatcgactgtatccagctcataaacgaggag
cacatgataacaggagctgatgatggctccgtgtctctttggagcgtcaacaagaagaag
cctctcagcaccgtgaagaaggctcacggttgccatggtgacgcagagctgcagcagcct
cattgggtcgcttcagtagcagcgcttcacaactcagataccgtcgcctcaggtgcttct
ggctgttcacacaactcacaggtgcagctctggaagtgcggccagaattaccgtgggctg
gagcctctattcagcatcccagtgcccggttttgtcaacagtcttaagttttcgagcgcc
ggtcagttcctggtggcaggagttggacaggagcacaggttgggccgatggtggaggcta
aaagaggccaagaatgggatctatgttattcctctcaaaaggaaacctcctaatccagag
gaagcaaagatgactgagtag

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