Seriola lalandi dorsalis (Yellowtail amberjack): 111658025
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Entry
111658025 CDS
T06058
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slal03009
]
111658025 (dcaf13)
04121 Ubiquitin system [BR:
slal04121
]
111658025 (dcaf13)
Ribosome biogenesis [BR:
slal03009
]
Eukaryotic type
90S particles
Other 90S particles
111658025 (dcaf13)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111658025 (dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Sof1
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
eIF2A
ANAPC4_WD40
Beta-prop_IFT140_1st
MIOS_WD40
KNTC1_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
111658025
NCBI-ProteinID:
XP_023266162
Ensembl:
ENSSLDG00000010517
UniProt:
A0A3B4XN25
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKLLSRNPDDYVRETKLDIQRVPRNYDPTLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHTKSLSTFFSGSCDGEVKVWDLTKQECVRTLQAHEGFVRGMVVRYC
GTSFFTVGDDKTIKQWKMEAPGYGEEEEPLNTILGKTVFTGLDHHQKEGVFATCGQQVDI
WDEQRSSPVRSFTWGVDSFSSVRFNPVETELLASCASDRSIVLYDMRESAPLKKVIMTMR
SNTLCWNPMEAYYFTCSNEDYNLYTYDMRHLDRPITVHMDHVSAVLDLDYSPTGKEFVSA
SFDKTIRIFPKDGGHSREVYHTKRMQHVICIKWSADNKYILSGSDEMNIRLWKANAAEKL
GVLGPREREATNYSQKLKEKFQHHPQIRRIAHHRHLPKNIYHQTKELRIMKEARRRKERN
VRKHSRPGAVPVVSEKEKHVVTVLK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcaaactcctctcgaggaacccggatgactatgtccgggaaacaaagctagat
attcagcgtgtccctagaaactatgatccaactctgcatccttttgaggtgagcagagag
tacacccgggctctaaatgccactaagctggagagggtgtttgccaagcctttcctggcc
tcgctggacggacacagggatggcgtaaactgcatggccaaacacaccaagagcctatcc
accttcttttccggttcatgtgatggagaggtgaaagtgtgggatctgaccaaacaagaa
tgtgtccgcacgctccaagcacatgaagggtttgttcggggaatggttgtccgctattgt
ggaacttctttctttacggttggtgatgacaaaacaatcaagcagtggaaaatggaggca
ccaggttacggagaggaagaagagccactcaacactattctaggcaagactgtgttcaca
ggactggaccatcatcagaaggagggtgtgtttgcaacatgtggccagcaggtggacatc
tgggacgaacagaggagtagcccagtccgttctttcacctggggcgtagacagcttcagc
tctgtccgcttcaaccctgtggagactgaacttctcgcaagctgtgcctctgacagaagt
atagtgctgtatgacatgagagaatctgcaccactcaaaaaggttatcatgacaatgagg
agcaacacactatgctggaaccctatggaagcatattatttcacatgctcaaatgaggac
tacaacctctacacatacgacatgaggcatctggaccggccaatcacagtgcacatggac
catgtctctgcagtgctggaccttgactactctcccactggcaaagagtttgtatctgcc
agttttgacaagaccatccgcatcttccccaaggatggcggccacagcagggaagtctac
cacaccaaacgcatgcagcatgtcatctgcattaagtggtcagcagacaacaagtacatc
ctgagcggctccgacgaaatgaacatccgactgtggaaagccaacgcagctgagaaacta
ggagtgctcggccccagagagagggaggctaccaactacagtcagaagctgaaggagaag
ttccagcaccacccgcagatccgacgcatcgctcatcaccgacacctacccaagaacatc
taccaccagaccaaagagctgaggattatgaaggaggctcgccgtaggaaggagaggaat
gtccgcaagcacagcagaccaggagctgttcctgtggtgtctgagaaggagaagcatgtt
gtcactgtgttgaaataa
DBGET
integrated database retrieval system
