Seriola lalandi dorsalis (Yellowtail amberjack): 111658578
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Entry
111658578 CDS
T06058
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111658578 (rlim)
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111658578 (rlim)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111658578 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
111658578
NCBI-ProteinID:
XP_023266928
Ensembl:
ENSSLDG00000008816
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MEGSDSLDQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFNRLQQIKDGPEQQNNTPSAETGEDPVVQPESSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEESPEGQEVGA
NAEPQVPMETEVVEEPVVEELAVIVEPEPEPELEEVVSQEILGEPPSSPAAPPVQPPLSP
SPRRGQRRARSRSPEPRRTRARTARSRSPLSLDQLDGLANLRQAHSSQGPNTATSAPPVP
QVEGSSRTRQHVLSRQSTADSDVQPPRAVAELVPEAQNVESQEGEAAGGEGGGEGGAAGR
RPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAG
VRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGAN
TPSDLGEALNNPDATPAAAPAADVDEPPVAAGVRARTVETDTVEGLATVPPASGGRARPR
PPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESDALKTCSVCIT
EYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtctagaccagagtggcagtgaccagccagagtcacaacgcagg
aggcagctggaccggctggatagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaagactatcgtctcatgagagacaacaatctcttaggcactccaggggaggtaaca
gaggacgaactgtttaatagacttcagcaaatcaaagatggtccagaacagcagaataac
acacccagtgctgaaactggagaagatccagttgtacaaccagaaagctctgaggatcct
gccagtggggatagtctcctggattggctgaacacagtgaggcgcacaggcaacacaacc
agaactggtcatcgtggaaaccagtcatggcgggcagtcagccagactaacccaaacagt
ggcgattttcgcttcagccttgaaatcagtgtgaaccgtaaccttgctgagcagcaggcg
gctgctgaaggggagcaggagtctccagaggaatctccagagggacaagaagtgggggca
aatgctgaaccgcaggtccccatggagacagaagtggttgaagaaccagttgtagaggag
ctggctgtcatagtggaaccagaaccagaaccagaactagaagaggttgtttcacaagag
attttaggagaacctcccagctcacctgctgccccaccagtacaacccccactttctccg
tctccacgcagaggacaaaggagagcccggagtcgcagtccggaaccacgcaggaccagg
gcccgtacagcaaggagccgctctcctctcagcttggatcagctggatggtcttgctaat
ctacgtcaggctcacagttctcaaggccctaacactgccaccagtgcgccccctgtgcct
caagtggagggcagttcacggactcgacaacatgttctttccaggcaaagcactgctgac
agtgatgttcagccacctagggctgttgcagaattggtcccagaggcccaaaatgttgaa
tctcaggaaggagaagctgctgggggagaagggggtggagaagggggggcagcagggcgc
cgtccccctactattatgcttgatctccaggtgcgtcgtgtgcgtccaggtgaatatcgg
caaagagacagcattgccagccgcacccgctcgcgctcccagaactcaaacaacacattt
ctttatgagagtgagcgtggtggatttcgtaggactttttcacgctctgagcgtgctggt
gtgaggacctacgtcagcactattcgcatccctattcgaagaatctctgatgcaggttta
ggagaggcaacctcaatggctctccaatctatgattaggcagattatgactggttttggt
gaacttggctacctcatggattcagactctgattcttcagattcaaaccgtggagccaac
acaccttcagatctgggtgaagccctcaacaacccggatgctactcctgctgctgctcct
gctgctgatgttgatgaaccacctgtggctgctggagtcagagcaaggacagttgagact
gatacggttgagggccttgccactgttccacctgcttctggtggcagagctcgaccgaga
ccacctatcagcctagaggagcccagctcattgcccttcctacggctcgcccacttcttc
ctcctaaatgatgacgatgaagaccagccccaaggactgacaaaagagcagattgacaac
ctctccatgcgcaactttggtgagagtgatgccttgaagacttgcagtgtctgcataaca
gagtatgcagaaggtaacaagctgcgtaagctgccctgttctcatgagtaccatgtgcac
tgcatcgatcgctggctgtctgaaaactccacttgccccatctgccgcagggctgtcctg
gtatcggccaatcgagaaagtgtggtttag
DBGET
integrated database retrieval system
