KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111658675
Entry
111658675         CDS       T06058                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
  KO
K19672  intraflagellar transport protein 140
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:slal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:slal03037]
    111658675 (ift140)
Cilium and associated proteins [BR:slal03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   111658675 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_HPS5 TPR_IFT80_172 WD40_Prp19 TPR_GEMI5 TPR_COPA_B Beta-prop_CAF1B_HIR1 Clathrin Beta-prop_DCAF12 Beta-prop_ELP1_2nd Beta-prop_WDR35_TULP_N Consortin_N tRNA_int_end_N2 MIOS_WD40 RPN7 DUF3485 TPR_12 TPR_2
Other DBs
NCBI-GeneID: 111658675
NCBI-ProteinID: XP_023267040
Ensembl: ENSSLDG00000012671
LinkDB
Position
Unknown
AA seq 1448 aa
MAVYFDHRIEAPESSAVPSQLTWHSALPVLAVASSSPATGGNVDLYLQQGEYVESCHVER
PYQPTVLRWHPTKPVLALGWEKGEVVLLTYPSGDQTVLPSTHTAYITLLEWSSSGSRLVS
GDQTGALAVWKVDARGRLQGNHLVKHEYNKPLTCCIFRPASPGDDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLAFYVSTVDGKVHSVDEHCKTSTLLSVEGSIKKLFYLEKREA
LAVITETLMLSQYTLGSEGGAQEFMKVKLSSKSGQNVDIVWTDNSLLITATGEQTVRLWD
LERDDNYVLSLDERLGFERGELINCVSYCTGKEILAAGTSHGRIAFWRMVAQPGGSKGDT
KVQWKLQTPTEIQGNVTQLQWGSSINLLAANNSNTVLILCEHVMSAHFSQQVAAVQLTPT
QLSIAQFTTGVNLALQSDIHIKGVCVTKDSVTVWSGKQVTVYEVSGTVLRNTGSFPCDSH
VVAVHGENLYTVEPNRVQIRTPQGTVKQLLTFSKAEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLADQIASLGALRSIKCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFIGRPSSGISHPDDGERQQFQGTELSGRCPVSHFWDESEPRLFVCETVPIS
SESSSASYLDMVDMSVVTLFCTQEHGLLLQDCYPKPTGLQALLALDVPFYYFSCKPGERD
PGSTEVSATTSAPPHQTQPSRGTPAKFPPMVSRRALRDFVGLENCEKATRDAMLNFSFYL
TIGDMDEAFKSIKLIKSKAVWENMARMCVKTCRLDVARVCLGNMGNARAAKALKEAEAQP
EPEAQTAMLAIQLGMLEDAEKLYKSCQRYDLLNNFYQASGQWQQALETAEIHDRIHLRTT
YYSYAKYLESMGDKTLALAYYENSDTHRAEVPRMLQDDTASLEVYVSKMKDKNIYKWWAQ
YLESQSDMDSALRFYECAQDFFSLVRVHCYMGNIQKASEIANNTGDRAASYHLARHYEGH
DDIKQAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACYYEEKGTHMDR
AVALYHKAGYVSKALELAFATQQFSALQLIAEDLNENSDPALLARCSDFFITHSQYEKAV
ELLVAAKKYHQALELCVTQNLTITEELAERMTVTDSKDMAEEARKEVLERIADCCMRQGN
YHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFANVCRQKELFIMAANYLQSLDWRKNPE
ILKTIIGFYTKGRAPDLLAGFYEACAQVEIDDYQNYEKALDALTEAAKCLSKVKDSTGKQ
EARLADLQHKITLIKKFVHARRLYAEDAGEAVQLCEALLEEPELDPAVRIGDAFGFLVEH
HCQQGNFQVAYRKLEELQKLLPSQNVRYYISQASLESLQKEMGVPMDRGDHRHNVKEDDE
VEEDLNLS
NT seq 4347 nt   +upstreamnt  +downstreamnt
atggcggtgtattttgaccaccgtattgaggcccctgaaagcagtgctgtaccctctcag
ttgacctggcactcggctcttcctgtattggctgtggcctcaagcagccccgccactgga
ggcaatgtagacctctacctgcagcagggagagtatgtggagagctgccatgtagaacgt
ccataccaacccacagtgctgcgctggcatcccacaaagccagtgttggcacttggctgg
gagaaaggagaggtagtgctgctgacatacccctctggagatcaaacagtcctccccagc
acacatacagcctacatcacactgctggagtggagcagctctgggagccgcttggtgagc
ggggatcagactggagctctagctgtgtggaaggttgatgctagagggagacttcaagga
aaccatctagtgaagcatgaatacaacaaacctttaacttgctgcatcttcagacctgcc
tcacctggggatgacgtggcgatgctagcacgggcatcagtgagtggagatgagagtgct
ctggatatgttcagctggaagggagcgcctctcaaaatgggcccacaggagggacttgcg
ttctatgtcagcaccgtagatggtaaggtccacagtgtggatgagcactgtaagacaagc
acacttctcagtgtggagggttcaatcaagaaactgttctaccttgagaaaagagaggcc
ctcgctgtgatcacagagaccctgatgctgtcacaatacactctgggatctgagggagga
gcccaggaattcatgaaggtgaagttgagcagcaaatctggacagaatgtagacattgtc
tggacagataacagcctcctcatcacagcaacaggggaacagactgtcaggctgtgggac
ctagagcgagatgacaactatgttttgtcactggacgaaagactggggtttgagagagga
gagctgatcaactgtgtttcttactgtacaggaaaagaaatcctggcagctggcacaagc
cacgggcgcatcgcattttggaggatggtagcgcagccaggtggtagcaaaggtgacacc
aaggtgcagtggaagctacagacacccactgaaatacagggaaatgtcactcagctacag
tggggctccagcattaatctgctggcagccaacaactcaaacacagtcctgatcctttgt
gagcatgtgatgtcagcccacttcagccagcaggtggcagcagtgcagcttaccccaacc
cagctcagcattgctcagttcaccacaggagtgaaccttgctctgcagtctgacatacac
atcaagggagtgtgtgtgactaaggactcagtgacagtgtggagtggcaagcaggtcact
gtgtatgaggtttcagggacagttctacgcaatacaggatcgtttccttgtgactcccat
gtagtagctgtacatggtgagaacctctacacagtggaacctaacagggttcagattcgc
acaccacagggcaccgtgaagcaactgcttactttctccaaggcagagggcaaccctgtc
ctactcagtgtgtgccagtcttacctggttgtgggcacagacacagcacacatcagagtc
tttgacctctctcgaagagatgctaaagctcactgcagtgctaagaacctggctgaccag
attgccagtctgggagccttgaggtcaatcaagtgtaacgccaatggcagccaagtcagc
atcctaatctctcaggttaatgggcgacccgatcacaaagtgtacttttatgatgttgag
atggacactgtgacacatttcgacttcttcattggcagaccatcaagcggtatctcacat
cctgatgacggtgaaaggcagcagtttcaggggacagagctcagtggtcggtgccctgta
tctcacttctgggatgagagcgaacctcgtctttttgtttgtgagacggtgccgatcagc
tctgaatcatcatctgccagttacttggatatggtggacatgtccgtggtgacactcttc
tgtacacaggagcacggtttactcctacaggactgctaccccaaaccgacaggcctgcag
gcccttctcgctctggatgtgcccttttattatttcagctgcaagcctggtgagagggat
ccgggttcaacagaggtttcagccacaacatcagcacctccacaccagacccagccatca
agagggacgcctgccaagttcccccctatggtgtccagacgagctctcagggactttgtg
ggcctggagaactgtgagaaggccacccgcgatgccatgctcaacttcagcttctacctg
acaatcggtgatatggatgaagccttcaagtctatcaagctcatcaaaagtaaagcggta
tgggaaaacatggcacggatgtgtgtgaaaacctgccggctggatgtggcacgtgtgtgc
cttgggaatatgggaaatgccagggcagcgaaagcactgaaggaggcggaggctcagcct
gaaccagaagcccaaacagcgatgttggccattcagctcggcatgctggaagatgcagag
aagttgtacaagagctgtcaacgctatgacctgctgaacaatttctaccaggcttctggc
caatggcagcaagctttggaaacagctgaaatccatgatcgcatccatctacgcaccacc
tactacagttatgccaaatacctggagtcaatgggtgacaagaccctggcccttgcatat
tatgagaattcagacacacacagggctgaagttcccagaatgctccaggatgacacagca
tctcttgaggtctatgttagcaaaatgaaagacaagaacatttacaagtggtgggcccag
taccttgagagccagtcagacatggattcagcactgcgtttctatgaatgtgctcaagat
ttcttctccttggttcgagtccactgctacatggggaacatccagaaggcatctgagata
gccaataacacaggtgacagagcagcatcgtaccacttggccagacattatgagggtcat
gatgatatcaaacaggctgtccatttctacacacgagcccaggcctacaacaatgccata
cgactttgtaaggagaatggtctggatgaccagctgatgaacctggctctgctcagtaac
ccagaggacatgatggaagctgcctgttactatgaggagaaaggcacccatatggaccga
gctgtcgcactctaccacaaggctggttacgtctccaaagctctagagttggcctttgcc
acacagcagttctctgcacttcagctgatcgctgaagatctaaatgagaactcagatcca
gccctcctggcccgctgctctgacttcttcatcacacattcccagtatgagaaggctgtg
gagttactggtagcagccaagaagtaccatcaagccctggagctgtgtgtgacccagaac
ttgaccatcacagaggagctggcagagagaatgactgtaactgattcaaaagatatggct
gaggaggcccgcaaggaagtgctggagaggatcgctgactgctgcatgcgtcagggcaat
taccacctggctaccaagaaatatacgcaggcgggcaacaagctcaaggccatgagggca
ctcctcaagtcgggcgacacagagaaaatagtattctttgccaacgtttgtcgtcagaag
gagcttttcatcatggctgccaactacctgcagtctctagactggcggaaaaatccagag
atcttgaagaccatcattggtttctacactaaaggcagagctccagacctgcttgctggc
ttctatgaggcctgtgctcaggtggaaattgatgattaccaaaactatgagaaggcacta
gatgcattgactgaggctgcaaagtgtctttcaaaagtgaaggactcaactggaaaacag
gaagcaagattggccgacctgcagcataagatcaccctaatcaagaagtttgtccacgca
cgcaggttgtatgcggaggatgctggtgaggcggtgcagttatgtgaagccctgctggag
gagccagagttggaccctgctgtcaggattggagatgcatttggtttcttggttgaacac
cactgtcagcaaggcaacttccaagtggcctatcgtaagctggaggagctccagaagctg
ttgccatcacagaacgtaaggtactacattagccaggccagtctagagtccctgcagaaa
gagatgggtgttcctatggatcgtggtgaccacaggcacaatgtgaaggaggacgatgaa
gtagaggaggatttaaatttgtcttaa

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