Seriola lalandi dorsalis (Yellowtail amberjack): 111658681
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Entry
111658681 CDS
T06058
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111658681 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111658681 (rab11fip3)
Membrane trafficking [BR:
slal04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
111658681 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
111658681
NCBI-ProteinID:
XP_023267047
Ensembl:
ENSSLDG00000012839
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MEPTVLSGPLGHTQWESDQPFPRGFHTLDSDNGGVLCQNMSGQTGLDFRDGDQDQTSQQS
EEEKVFQDKPVELDNLINISDFSCGDVKFEANQSLNCKTSLHRTHLEELSYTEKTEGPDD
ISDCTLSWLFPPNLTDVVGKNFACEELNVTQEALLEGSNGLSSQAELISLSVPVSPSKIS
TKNSEANIRDPFMLVDLSNDTPCLPPESSGEFNPQGVSEELVDLSQEEQAGLPPSQSRET
LSPETGDKGLFPDQVTDLPVTSSTTLEGLPENCFSQNHVSTPLECFEGSVPLLDLKVPDC
DSSLSLCPASPASVICTGALLHLSTEESEVEHAGAAVIRNLTSEQQGENDSFALSLSAEP
SSLTVPLAEDAFIEGNFTSESYSVENVSKDLMEDKTCSEAKNQGNEAMALDLCLTADEVH
DEETWDLKPQEGVQGGSVPDPTTEQREEEKVIDTNQLERSDCHEIAPFDFSVQDLNTSSP
EAGWTSEQTVETISLSKMVVDDSLPMVSAVSTREEDVSPLKAVFDALDQDGDGFVRIEEF
MEFAAAYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGPEPQLYNVNYSPGDGAV
GCPEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVPPEMHEDVETDSGIEATLHDP
EDGGNRFSLNSELHNHSLVTVISGEEEHFEDFGESNTSELLLESSVEGTEGEADSSLVQP
LEQVNGSSLLSPSAPAPLPDCFQSFLREEALDFFCSQCHKQISRLEDLSTRLNFLEMTSA
GKRLSSKKVARHLLQNSSMTLDTMSDLTRDILELADNDITDKVLLLERRVAELEKESEAS
GEQHARLRQENLQLVHRANALEEQLKEQELHADEQLQQETRRHKEALSKLERERGLELEN
LQARLQQMDEENSELRSCVPCLRANIERLEEEKRKLQDETEVMSDRLKDETESRRKMGDK
LSHERHQSHKEKECTQELIEDLRKQLEHLQLYKLEAEAKRGRSPGAGLQEYQTRTREAEL
EQEIKRLKQDNRSLKEQNDELNGQIINLSIQGAKNLMSASFSDSLAAEINSVSRAELMEA
IHKQEEINYRLQDYIDKIIVAIMESNPSILEVMYGQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgacagttctctctggccctttggggcacacacagtgggagtcagaccagcca
tttcctcgtggatttcacacactggattcagacaatggaggtgtgctttgtcaaaacatg
agtggccaaacaggtttggatttcagagacggtgaccaggatcaaacatcccaacaaagt
gaagaagaaaaggttttccaggacaagccggtagagttggacaacctcataaatatctct
gatttttcttgtggagatgtgaaatttgaggccaatcaatctttaaactgcaaaacctct
ctccatcgtactcatctagaggaattgtcttacacagaaaaaactgagggacctgatgat
atcagtgactgtactttatcatggctatttcctcccaacctcactgatgtggttggaaaa
aactttgcctgtgaggaactgaatgtgacacaggaggcccttcttgagggctcaaatggc
ctcagtagtcaggctgagctaataagcctcagtgtacctgtctctccatcaaagatttcc
acaaagaattccgaggccaacataagggatccatttatgttggtagatctctcaaatgac
accccttgtctccccccagagtcttcaggtgagttcaacccacagggtgtcagtgaggag
ctggtagacctgtcacaagaggagcaggcgggtctccctccctcacagagcagggagact
ttgtcacctgaaactggagacaaaggtttattccctgatcaagtgactgatctgcctgta
accagtagcactaccctggaaggtttgcctgagaactgcttctcacaaaaccatgtcagc
acgccactggagtgttttgaaggatctgtgcctttgttggatttaaaggttccagattgt
gacagcagtctgagcctgtgcccagccagtcctgcctctgttatctgcacaggtgcgctg
ttacatttatcaacagaggagtcagaggtggaacatgcaggagctgctgtaattagaaat
ctgacttcagagcaacaaggtgagaatgactcatttgctctgagtttgtcagctgaacct
tcatcactgacagtgcctctggctgaagatgccttcattgagggtaatttcaccagtgag
agttattctgtggagaatgtgtctaaggatttgatggaagacaaaacttgttctgaagcc
aaaaatcaggggaatgaggcaatggctttggatctgtgcttaactgctgatgaggtccat
gatgaggaaacatgggatttgaaaccacaggagggtgtgcagggtggaagtgttccagat
ccaacaactgaacagagggaagaggagaaggtgatagacactaaccagctggaacgatca
gattgtcatgaaatagccccctttgatttttcagttcaggacttgaacacttcttctcct
gaggctggatggactagtgagcaaactgtggagacaatttccctttctaagatggtggta
gatgactcactgccaatggtttcagctgtgagcacaagagaggaagatgtctccccacta
aaagctgtattcgacgctttagaccaagatggagatggctttgttcggattgaggagttt
atggagtttgctgctgcctatggggctgatcaggtgaaggatctgaccaagtttttggat
cccagtggcctgggagtgatcagctttgaagacttccaccgtggaatctctgcaattagc
aatggaggtccggagccacaactctacaacgtaaactacagccccggggatggagctgtg
ggctgtccagaggaatacgatgagcaaaatgaggtgaccgacagtgcatacctgggctcc
gagagcacatacagtgagtgtgaaaccttcactgatgaggacacaggggccctcgtaccc
cctgagatgcatgaggatgtggagacggacagcggcatcgaggccacgctgcatgaccct
gaagatggcggaaataggttttccctgaactctgagctccataaccactccctggtgacg
gtcatcagtggagaggaggagcactttgaggactttggtgaaagcaatacctcagagttg
ctactggagagcagcgtggaggggacggagggggaggccgactcttctctcgtgcagccc
ctggagcaggtcaatggctcctcacttctgtctcccagtgcacctgctcctctccctgac
tgctttcagagcttcctcagggaggaggcgctggactttttctgtagccagtgtcacaaa
caaataagtcgtctcgaggacctctccactcgcctcaatttcctagagatgactagcgct
ggtaagaggctgtccagcaagaaagtagcaagacatctcctccagaacagctccatgact
ctggacaccatgagcgacttaacacgggacatcctggagctcgctgacaatgacatcaca
gacaaggtgctcctccttgagcgtcgagtggcggagctggagaaggagtcggaggcctcg
ggggagcagcacgctcggctgcgccaggagaaccttcagctggtgcaccgggcaaatgcc
ctggaggagcaactgaaggagcaggagctccatgctgacgagcaactacagcaagagacc
cgccgccacaaggaggccctgagcaagctggagagggagagggggctggagcttgaaaac
ctgcaggccaggctgcagcaaatggatgaggagaacagtgagctgcggtcctgtgttcct
tgtctacgagcaaacatcgagcgactagaggaggagaagaggaagctgcaagatgagaca
gaagtcatgtctgacagacttaaggatgagacggagtcccgcaggaagatgggtgacaag
ctcagccacgagcgccaccagagccataaggagaaggagtgcacacaggagctaattgaa
gacctacgtaaacagcttgagcacctacagctgtacaagttggaggccgaagcaaagaga
gggcgctcacccggcgcagggctgcaggagtatcagacccgcacccgcgaagccgagctg
gagcaagagatcaaacgactcaaacaggacaaccgcagcttgaaggagcagaatgacgag
ttaaacggccagatcatcaacctgagcatccagggagccaagaacctgatgtcggcctca
ttctccgactccctggcagctgagatcaactctgtgtctcgcgcagagctgatggaggct
atccacaagcaggaggagatcaactacagactccaggactacatcgacaaaatcatcgtg
gccatcatggagtccaacccctccatcctagaggtgatgtatggtcagtaa
DBGET
integrated database retrieval system
