Seriola lalandi dorsalis (Yellowtail amberjack): 111658698
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Entry
111658698 CDS
T06058
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111658698 (rnf40)
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111658698 (rnf40)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
111658698 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
OVT1
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
111658698
NCBI-ProteinID:
XP_023267082
Ensembl:
ENSSLDG00000013579
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSQLEENVHILRKRIEPETPV
KSTPTPPVGVGAAPLPDPTPMEEDGVNLASPTSAVPPPPLPEAQNEGEQAEQQQEEHQEE
HQEEQQQQQQPPPPAGSEELITPTEPPQDSTTDASPPPPPLSENAKGFLATLEHSNEEEL
ALHLQDRMQFSKEAIACLVCVFDRLHTRIDNMCKQVQTAACDDDSQSDVISVSHTLLEEN
SRLRDLATLLQGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKLRNREQKLN
KHLAEAMEQLKSGYSSTGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQ
VELQEAVRESEKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLL
TAKNAHLRQIEHMESDELSLQKKLRTDVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAG
PINREMRHLISSLQNHNLQLKGDVQRYKRKLRETQMEINKFRCQSGDTGVLILEETTSDS
IDVKKEEDEDQEEEEERRKELERQRAREREREAERERERERERERQRSDELKRKDSDTLK
MLRVELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEER
ERKESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNS
RLLQQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEE
KEGVLQSTLAALEKELAVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAE
NRTARERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNT
RDKETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggaggaaagcgtccctcaggaggggacagcccccctggcccacct
gagaagaaaagcaaaaaagaggagaagaccaccacaaccctcatagagcccattcgcata
gctggagtctcttctacggaggaaatggacatgaaggtgcttcagttcaagaataagaag
ctatgtgagcgcttggagcagagacaggcaatggaggatgagctacgagagaaaattgag
aagctggagaagagacaagccactgatgacaccaccctgctgattgtcaaccgctactgg
tcgcagctggaagagaacgtgcacattctacgcaaacgtattgagccagaaactccagtg
aaatctacccctaccccaccagtaggggtaggggcagcccctctacctgatcccacacca
atggaggaagatggtgtcaatctggcttcaccaacctctgctgttcctccacctcctctt
ccagaggcccagaatgaaggcgagcaggcagagcagcagcaggaggagcatcaggaggag
catcaggaggagcagcagcagcagcagcagccccctcctcctgctgggtcagaagagctg
ataacaccgacagagccaccacaggactcaacaacagatgcgtcaccgccccctcctcca
ttaagtgagaatgccaagggtttcttggccacattggagcacagcaacgaggaggaactc
gccctgcacctccaggaccgcatgcagttcagcaaggaggccatcgcctgcttggtctgc
gtctttgacaggctacacacccgcatcgacaacatgtgcaagcaggttcagactgcagca
tgtgatgatgatagccagtctgatgtcatcagtgtaagccacactctgttggaggagaac
agtcgactgcgggacctggccactctcctgcagggccgacaccacaagatgtctatggag
tacaatgagttggtggacaaggtgaccagttctgagaccaaggtgtctgagatggagacg
acagtagaggacctgcagtgggacatcgagaaacttcgcaatagggaacaaaagctcaac
aaacatttggcagaggctatggagcagcttaagtctggatacagcagcaccggcagctca
ggtgggctacctggaggacagattacactgaatattcagaagtttgaaagtctcaatgca
gagttggagcacaaccaggagttagcaaatagccgcatggcagagttggagaaactgcag
gtggagctccaggaggctgtgagggagagcgagaagctcaagatggacttgcgcaatatt
ccagaagaggttgtgaaggagactctagagtacaaatgtctgcagtcgcagttctccctg
ctgtacaacgagtctctcggggtcaaaacccagctggatgaggcacgggcactcttactc
actgcaaagaacgcccacctccgacaaattgagcacatggagagtgatgagctgtccctt
cagaagaagctgcggactgatgtcattcagctggaagacaccttggcccaggtgcgcaaa
gagtatgagatgctgcgcatcgagtttgagcagaatttggcagccaacgagcaagcagga
ccaatcaacagagagatgcgacacttaatcagcagtcttcagaaccacaacttgcagttg
aaaggtgatgttcagcgttataagaggaagttgcgggaaacacagatggagatcaataag
tttcgttgtcagagtggtgacacaggagttctaattcttgaggagacgacgagtgatagc
attgacgtaaagaaagaggaggatgaggaccaggaggaggaagaggagaggaggaaggaa
ctggagagacaacgggccagggagagggagagggaggctgagcgagaacgagagagggag
cgtgagagagagagacagcgcagtgatgagctgaagaggaaggactcggacacactgaag
atgctcagagtagaactcaagaaagcccaggagtcccagaaagagatgaagctattgttg
gacatgtacaagtcggctccaaaggagcaaagggacaaagtgcagctcatggcagctgag
cgcaaatctaaagctgaggtggatgagttgaggatgagggttcgagagctggaggagagg
gagaggaaggaaagcaagaagctggctgatgaagatgccctcaggaagatcagagttgca
gaagagaccattgagcatctgcagaagaaacttgctgccacaaaacaggaggaggaagcc
ctgctgagtgagatggatgtaacaggccaggctttcgaggacatgcaggagcagaacagc
cggctgttgcagcagttacgggagaaggatgatgccaatttcaagctgatgagtgagcga
atcaaatcgaaccagatctacaagctgctgaaagaggagaaggaggagctggcagaccaa
gtcctcacattcaaaacccaggtggatgcccagctgctggttgtgcagaagctagaagaa
aaagagggtgtcctccagagcacattggctgctctggaaaaagagctggctgtccggaca
caagcactagaactcaacaagaggaaggcggtggaggctgcccagctggcagaggacctg
aaggtgcagctggagcacacacaggccaagcttaaagagatccaggtctctgtggcggag
aaccgcaccgcccgagagagggagagcagcaacctgaaacgagcacaggaggatctgtcc
aggctgaggcggaagctggagaaacagaagaaggtggaggtttactctgacgctgatgag
atcctgcaggaggagatcaatcagtacaaggccaagctgcgctgcccctgctgcaacaca
cgagacaaggagacggtgctcaccaagtgtttccatgtattctgctacgaatgtctgaag
atgcgttacgacacacgacagaggaagtgccccaagtgcaactgtgccttcggagccaat
gactttcaccgcatctacatcacctaa
DBGET
integrated database retrieval system
