Seriola lalandi dorsalis (Yellowtail amberjack): 111658745
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Entry
111658745 CDS
T06058
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111658745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111658745
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111658745
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
HECT type E3
111658745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
111658745
NCBI-ProteinID:
XP_023267158
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MFTWGEDCQRGFWLKDSCSGSDGEPEDGVHFLNLSYRIRDLSAGHSVLAFVKTNGNAFII
RTNESNDGRRVRGKQKFVKCKEKIQAVSCGDDLVTLLSDRGTVFSVDTTRPPFTPRPLEA
FCSVPVSQVACGSQHSVALTKDGQVYTWGQDSRGQLGLGKVKTDANSPQHLRSLSAIPLV
QVAAGGEQSFALSVSGGVFGWGRNDRGQLGLGDTTDRHTPTPVHYLNNRKIIHISCGKDH
TAVLTKDGAVFTFGSGQYGQLGHNSFRDELRPRLVAELWGAKVTKIACGRHHTLVLTHSR
RVYSFGREEQGQLGHGEESHPSVPLPVQLPQNLGDGPKIGNIYAGGNCSFATCMSDKDIQ
GGLNTDTTNNVTHHSLDGMIHRWTSKCDSKSRKKRNQQIHRMFSSASCLNQSFLDRSKDK
HFQTSSKDCGLNLSLAQLNFEKLVKKDAVWTEVEAAVLQLLPSLDGNPVGVEGLRVFLLL
NELLHVKQKQILLPSTDLAEAVAAAFQRLSPESLQVIGDWWCSLPVSTMVRYVTVWKQAL
SLSIRPLPYNTGVINLLLVLQHMYNANNRRARCTRIPEKTYCLGINQEILTEDVLLWRST
SKIQDVNYQPTSLCNYPFVMDLKSKKMAYDIDAELIRSEHQVMLPGPYGWVVQPESYFGL
KLKRASLLKGAFSQLAAAAAADHSVFKKWLVVYFDEDPKITDVYKRDFFHHLFHKIAKTG
MYVFNDSERVAWFPSKTTKKNKNKFFLFGVLCGLALYNQSIIYLPFPLALFKKLLGVEPT
LEDMMELNPSVGKTLQNVLDYDDDLEDLGMSFQIQCDGTDVELDPQNPGKPVTSQNRKEF
VDAYVTHVFNTSVESVFQEFKRGFFLVCDWDFVKLFRPEELQGVLVGDDVYDWAKLKQNT
VYEGYHNRHPIIQMFWEVFDELTEEQKKDFLLFLTGFRKAPILGMDQIHMRVQVKQIWDG
SHDQHCPESLTCHSILQLPLYSAKGIMRDKLIEALMPRRGFERL
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgttcacctggggagaggactgtcagcgcggcttctggctgaaagactcctgctcaggt
agcgacggtgaaccggaggatggagttcacttcttaaacttgagttaccgcatccgggat
ctgtcggcaggtcacagtgtgctcgcttttgtcaaaactaatggaaatgcgttcatcatt
cgcacgaatgagagcaacgatgggagaagagtcagagggaaacagaagttcgtgaagtgt
aaggagaagattcaggctgtgagttgtggtgatgatttggtcacactgctgtctgacaga
ggcacagttttcagtgtggacacaactcgtccccctttcaccccaagaccgctggaagct
ttctgcagcgtaccagtttctcaggttgcttgtgggagccagcattcagttgctctgact
aaagatggtcaggtgtacacatggggtcaggattccaggggccagctgggtctggggaag
gtgaagaccgacgccaactcaccccaacacctccggtctctgtcagcaatccccctggtt
caggtcgctgcagggggagagcagagcttcgccctctctgtctctggaggtgtgttcggc
tggggcagaaacgaccgcggacagctcggcctgggagacacaacagacagacatacacca
actcctgttcactacctgaacaataggaaaattattcacatttcctgtggaaaggatcac
actgccgttctgacaaaggatggtgcagtgtttacatttggctctggtcaatatgggcag
cttgggcacaactcattcagggatgaactacgccctcggcttgttgcagagctctggggg
gcaaaggtcaccaagattgcatgtggacggcatcacacattagtgctgacacactccagg
agggtctactccttcgggcgtgaggagcaagggcagctgggacacggagaggagagtcat
ccatctgtgccactacctgttcaactgccgcagaatctcggcgatggtcccaaaatagga
aacatctacgcaggaggaaactgttcttttgcaacgtgcatgtctgacaaggacattcaa
ggagggttgaacacagacactacgaacaatgtgacacatcactctcttgacgggatgatt
cacagatggacgtctaaatgtgactcaaaatcacggaaaaagagaaatcagcaaatccac
aggatgttttcctccgcttcctgtttgaatcaaagttttctggaccgaagcaaagataaa
catttccagacctcatcaaaggactgcggcttgaacttgtctcttgcacaacttaacttt
gagaagctggtgaagaaggatgctgtttggacagaggttgaagctgctgttctgcagttg
cttccttctcttgatgggaatccggtgggagtggaggggctgagggtcttcctgcttctc
aatgagctgctgcatgtgaaacagaaacagatcctgctcccgagcacagacctggccgag
gccgtggctgctgcctttcagagactgtctcccgaaagcctccaggtcataggggactgg
tggtgctcgctcccggtctccaccatggttagatatgtgacggtgtggaagcaggctctc
tcgctgtccattcggcctcttccttacaacactggagtcataaatctgctactcgtcctc
caacacatgtacaatgccaacaacaggagagcaagatgtacaagaatcccagaaaaaacg
tactgtttggggattaaccaggaaattcttacagaagacgtgcttctgtggcgctcaacc
tcaaaaatccaggatgtgaattatcaaccaactagcctgtgcaactacccgtttgtgatg
gatctgaagtcaaagaaaatggcttatgacatcgatgcagaactcatacggagcgaacac
caggtaatgttacctggcccttatggatgggttgtccagcctgaatcttacttcggacta
aagctgaagcgagcttctcttttgaagggagccttcagtcagctggctgctgctgctgct
gcagatcacagtgtcttcaagaagtggcttgtggtgtattttgatgaggacccaaagatc
acagatgtctacaaaagagacttttttcaccacttgtttcataaaatagctaaaactggg
atgtacgtgttcaatgactccgaaagggtggcatggttcccatccaaaacaacaaagaag
aacaagaataaattcttcctgtttggggttctgtgtggactggccttgtacaaccagagt
atcatatacttgcccttcccactggcgctgttcaagaagctgcttggcgttgagccgaca
ctggaggacatgatggagttaaacccatctgttggaaagacactgcagaatgtgttggac
tatgacgatgacctggaggacctgggcatgtcttttcagatccaatgtgatgggacagat
gttgagcttgatccccaaaatcctggaaagccagtgacaagtcaaaataggaaggagttt
gtggatgcctacgtgactcatgtcttcaacacatcagtggagagtgtgtttcaagagttc
aagcgaggcttcttcctggtgtgtgactgggattttgtgaagctgtttcggccagaggag
ctgcagggagtcctggtaggcgacgatgtctatgactgggcgaagctcaaacagaacaca
gtttatgaggggtaccacaatcgccaccccatcatacagatgttttgggaggtttttgat
gagctaactgaagaacagaagaaagatttccttctcttcctgactggttttaggaaggct
cctattctcggcatggaccagatccacatgagggttcaagtcaagcaaatctgggacggc
tcccacgatcagcactgccccgagtctctgacgtgtcactctattctgcaactgcccttg
tattcagcgaagggcatcatgcgagacaaactgatagaggctctgatgccgaggagagga
ttcgaaaggctgtga
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