Seriola lalandi dorsalis (Yellowtail amberjack): 111658987
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Entry
111658987 CDS
T06058
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111658987 (srf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111658987 (srf)
Transcription factors [BR:
slal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
111658987 (srf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
111658987
NCBI-ProteinID:
XP_023267517
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MLPSQVGSAPSGNGSASGRGTTGHGSGIVGSGIRPVLVRAGQALAGVSDSTGAAGRLGER
DAIGMLGANGPGGPRGTRPGNGTGVTPLQTAVQGNMVGLNTGVVLPHGARFDPDRESAPL
CSGSDNDSDSGDDDDPVGSLGDSRRGVKRERGEMEAAVTGQEVGVPPGGYGMVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDTKDTLKPTFTVASLPGTTSSSQSTVPTTSTTMQVSSGPSFPITNYLAPVSASSNVS
ANGTVLKTAGASTGVMQLPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLALQGQHGQTLAA
AQQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQSTSNNDSSPEISHTSTNSTAT
VSLPATIVTSSVPTSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTSAMQVSHAQ
AQDTGAVPQVFLTAPPGTVQIPVSAVQLHPMVIGQQSSGSSSNLTELQVVNLDATQNSKS
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgagccaggttggatctgcaccatctggaaacgggtcagcttcaggcaggggt
accacaggacacggttcggggattgttggtagcgggatccgtcccgttttggtcagggca
gggcaagctttagctggggtcagcgacagcactggtgctgccgggcgactgggggaaaga
gacgccatcgggatgctgggggctaatggtccagggggtccgagaggtacgagaccgggg
aacgggacaggggtgacacctctacagaccgccgtccagggaaacatggtggggttgaac
acgggagttgtgttgcctcacggagcccggttcgacccggacagagagagtgctccgctc
tgcagcggctcggataatgactcggactcgggagatgatgacgaccccgtgggttcactc
ggggacagcaggagaggggtgaagcgggagagaggggagatggaagctgcggtgacgggg
caggaggtgggagtacctcctggaggttacggcatggtgcccggaggggtcgccggggca
aagccgggaaagaagacacgtgggcgcgtaaagataaagatggaatttattgacaacaag
ttgagacgctacacgactttcagcaagaggaagacgggtattatgaaaaaggcctatgaa
ctctccaccctgacgggaacccaggttctgttgcttgtggccagtgaaactggtcacgtt
tacacttttgccacccgcaaactccagccaatgatcaccagtgaaacgggcaaagccctg
atccaaacatgcctcaactcgccggactcaccaccacgctctgacccctccacggaccag
cgcatgagtgccacaggcttcgaggagacggacctcacctaccaggtgtcggagtcggag
agcatgggcgacacaaaggatacactgaagccgacgttcacggtagccagcctaccaggc
actaccagcagctcccagtccacggtacccaccacctccaccaccatgcaggtgagcagc
gggccctcttttcccatcaccaactacctggcgcccgtctcggccagcagcaacgtcagc
gccaacggcaccgtcctcaagactgccggtgcctccacgggggtcatgcagctgcccggt
ggcttcactttcatgcccgcaggcactcctctcccccctggtacccccaccattcctctg
agccagctgcagcagcactctctggccctccaggggcagcatggtcagaccctggccgcc
gcccagcagccacagcagggacagcaggctgtattccgcttccctgctgctgtctccctc
acaggagcgggggttccccagcagcttcaggctatccaggtccaccccaacacccagtcc
acctccaacaacgacagcagccccgagatctcccacacctccacaaactccacggcaacg
gtgagtctcccagcaaccatcgtcacctcgtcggtgccaacgtctgtggcgggtcacatg
atgtaccccagcccccacacagtaatgtacgcctccacgccggcgctggctgacgggggg
ctggccgtgctcaacgccttctcccagggcacctcggccatgcaggtgtcccacgcacag
gcccaagacacaggtgctgtccctcaggtgttcctcacagcacctccaggcacggtgcag
atccctgtctcagcggtgcagctacacccaatggtgattggccagcagtcgagcggcagc
agcagtaacctgacggagctccaggtggtcaatttggacgccacacagaactcgaagagc
gactga
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