Seriola lalandi dorsalis (Yellowtail amberjack): 111659012
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Entry
111659012 CDS
T06058
Symbol
thbs2
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04145
Phagosome
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111659012 (thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111659012 (thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
111659012 (thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111659012 (thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111659012 (thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slal04147
]
111659012 (thbs2)
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111659012 (thbs2)
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Opsonins
111659012 (thbs2)
Exosome [BR:
slal04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111659012 (thbs2)
Exosomal proteins of colorectal cancer cells
111659012 (thbs2)
Exosomal proteins of bladder cancer cells
111659012 (thbs2)
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111659012 (thbs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CCN
TSP1_CFP_C
TSP1_ADAMTS
cEGF
Laminin_G_3
EGF
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
111659012
NCBI-ProteinID:
XP_023267586
Ensembl:
ENSSLDG00000020615
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MILRRSLFLLLLSINFLHALPQDGEQEDETSFDLFEISHITRKTLGAKQFRGQNSDVPAY
RFIRFDHLPPVSPPILKQILRQIQNNEGFVFVASIRQDRASRGTLIGLEGPDGRRQFEIV
SNGRANTLDIYYSVDGSQNVVSFEDVDLSDSQWKNITLHIHGENANLFVGCNLIDSFILD
EPFYEHLQAEGNRMYVAKGSIRENHFRGLLQNVRFIFDTPVEDILLSRDCEVTKPDDANI
VSESTEMVDVSPSITTNIIGQKTDEMGADMCERSCEELSTMFQELKGLRVVVSNLIDGLQ
KVTEENTIMREVIGKLNSKEKNMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP
PVACASPSFIDGECCPVCIPIESEDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCTG
PSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDCE
GSGRETQRCTAKPCPIDGGWGPWSPWATCSATCGGGVKSRTRECNSPQPQHGGNKCIGEA
NDSDSCNKEDCPIDGCLSNPCFGGVDCNSSPDGSWECGPCPAGFRGNGTHCEDINECDMV
SDVCYKVSGTQRCVNTDPGFHCLPCPKRYKGTQPFGMGVEAAKKNKQVCEPENPCKDKTH
NCHKYAECIYISHFSDPMYKCECRTGYAGDGFICGEDSDLDGWPNQNLVCGANATYHCKK
DNCPSLPNSGQEDFDKDGQGDACDKDDDNDGILDERDNCPLLYNPRQFDFDKDEVGDRCD
NCPYEHNPAQIDTDHNGEGDACAVDIDGDEIMNENDNCPYVYNTDQKDTDMDGVGDQCDN
CPLLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDACD
YDDDNDGIPDDKDNCRLTPNADQLDADGDGRGDACKDDFDNDSIPDILDVCPENNAISAT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYVN
TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEN
LRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPIYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPELPTVFTR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagaagtctcttcttgctgctcttatcaattaatttcctccacgcatta
cctcaagatggtgagcaggaggacgagacatcatttgacttgtttgaaatcagccacatc
acacgcaaaactctgggggccaaacagttccggggccaaaactcagacgtccctgcttac
cgcttcatccgcttcgaccaccttcccccagtgagcccccccatactgaagcaaattcta
cgacagatccaaaacaatgagggctttgtgtttgtggccagcatacgccaggaccgcgcc
tcacggggcaccctgattggtctggagggccctgatggccggcggcagtttgagattgtg
tccaacggacgggccaacactctagacatttactactcggtggacggctcgcagaatgtg
gtttccttcgaggacgtggacctgtctgactcacagtggaagaatatcactcttcatatt
cacggggaaaatgcaaacctgtttgtgggctgcaacctgatagacagcttcatcctggat
gagcctttctacgagcacctgcaggctgagggaaaccgcatgtatgtcgcgaagggatcc
atccgagagaaccacttcaggggccttctgcagaatgtgcgtttcatctttgacacccca
gtggaagacatcctcctgagcagagactgcgaggtcactaagccagatgatgctaatatt
gtgagtgagagcacagaaatggtggatgtgagtccttccatcactacaaacattataggt
cagaagacagatgagatgggagccgatatgtgcgaacgctcctgcgaggaacttagcacc
atgttccaggagctcaaaggccttcgtgttgtcgttagtaaccttattgatggcttgcaa
aaagtgacggaggagaacacaatcatgagggaggtcattgggaagctgaactctaaggag
aaaaacatgtgctggcaggatggccgcctgtttgaggataaggaagactgggtggtagac
agctgcaccaaatgtacttgccaggagtccaagatcgtgtgtcaccaaatcacatgcccc
ccagtggcctgtgccagcccctcgtttatcgacggcgagtgctgccccgtgtgtatacct
atagaaagtgaggacggctggtccccttggtcagagtggacagagtgcacagtcacctgt
ggtacaggaactcaacagaggggtcggtcatgtgatgcaaccagtaacccctgcaccgga
ccctctatccagacccgcaagtgtagcttgggcaaatgcgacagccgtgttcgccaggac
ggagggtggagtttgtggtcaccgtggtcctcctgctctgtgacctgtggagaaggacag
atcaccaggatacgacactgcaatgctcccgtgccacagctggggggcaaagactgcgaa
ggaagcgggagagagactcagcgctgcactgccaagccgtgtcccattgatggtggttgg
ggcccttggtctccgtgggcaacctgttcagcaacatgcggagggggggtcaaaagtcga
acacgcgagtgcaacagccctcaacctcagcatggcggcaacaagtgtatcggggaggcc
aacgacagtgacagctgtaacaaagaagactgtcctattgatggctgtctgtctaaccca
tgctttgggggagtggactgcaacagctctccagatggatcctgggagtgtggcccatgc
cctgctggtttccgcggaaatggtacccactgtgaagacattaatgagtgtgatatggtg
tctgatgtttgctacaaagtgagtggaacgcaacgctgcgtcaacactgatccaggtttc
cactgcctgccctgtcccaagcgctacaagggcacccagcccttcggtatgggtgtggag
gccgccaagaagaacaaacaggtgtgtgagccagagaacccgtgcaaggacaagacccac
aactgtcacaagtatgccgaatgtatctacatcagccactttagtgacccaatgtacaag
tgtgaatgtaggaccggttacgctggagatggcttcatttgtggtgaagactcagacttg
gatggttggcccaatcagaaccttgtgtgtggcgccaacgccacttatcactgcaagaag
gacaactgccccagccttcccaactctggacaagaagactttgacaaagacggtcaagga
gatgcttgtgacaaggatgacgacaacgatggaattctagatgagagggacaactgcccc
ctcctttacaatcctcgccagtttgactttgacaaggacgaagtcggtgacagatgcgac
aactgtccctatgaacacaaccctgcccaaatagacaccgaccacaacggagaaggggat
gcctgcgcagtggacattgatggagatgaaattatgaatgagaacgacaactgcccctat
gtatacaacactgaccagaaggacactgacatggatggagttggtgaccagtgtgacaac
tgtccactgctgcacaaccctgaccagactgacgtagacaatgacctggttggagatcag
tgtgacaataaccaggacatcgacgaagacggccaccagaacaacctggacaactgtccc
tatgttgccaacgccaaccaggctgaccatgacaaggatggcaaaggagacgcatgtgac
tatgatgatgataatgatggtatacccgacgacaaggacaactgcagactaacgcccaac
gcagaccagctggatgctgacggcgatggaagaggggatgcctgcaaagatgactttgac
aacgacagcatcccagatattcttgatgtgtgtccggagaacaacgccatcagtgccaca
gacttcaggaagttccagatggtccacttggatcctaagggaaccactcaaattgatccc
aactgggtggtcagacaccagggcaaagagctggtccagactgccaactctgacccaggc
attgcagtaggttttgatgagttcaatgcagtggacttcagtggaacgatgtacgtgaac
acagacagagatgatgactatgcgggctttgtgttcggctaccagtcgagtgggcgcttt
tatgtagtcatgtggaagcagatcacacagacttactgggaggacaagccctccaaggcc
tttggcatctctggagtttcactcaaagttgtcaactcaaccactggcactggagaaaac
ctcaggaatgctttgtggcacacgggcaacactcccggacaggtgcgtactctgtggcat
gaccccaaaaacatcggttggaaggattacacagcctacaggtggcatctcatccacaga
ccaaagacgggctttataagggttgtggtctatgaaggtaaacagatcatggccgactca
ggaccaatttatgacaagacttttgccggaggaaggttaggcttgtttgtcttctcgcaa
gagctggtgttcttctccgacctcaagtatgagtgcagagataagccggagttgccaaca
gtgttcacgagataa
DBGET
integrated database retrieval system
