KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111659038
Entry
111659038         CDS       T06058                                 
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111659038 (exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111659038 (exosc1)
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111659038 (exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     111659038 (exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 111659038
NCBI-ProteinID: XP_023267621
Ensembl: ENSSLDG00000025181
UniProt: A0A3B4YSX1
LinkDB
Position
Unknown
AA seq 194 aa
MSPMKLCVPGDKLCSIDDCIPGTGVYLRHGYIYSSLAGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHTKE
FRKVARVQPEYLQA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgacaaactatgcagcatagacgactgtatt
ccaggcacaggagtatatctgcggcacggctacatatactcctcactagcaggctacgtg
ctcaagaaaaacgagggcgaggagttacctgtgatctcagtggtgagggaaacagaaaca
caactactgccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaaccccagg
ttcgccaaggtccacatcctttatgtaggctccacgccgctgaaggaccgcttcagaggg
actatcagaaaagaagatgtgcgggcaacagagaaagacaaggtggagacatacaaaagc
ttcagacctggtgacatcgtcttggcgaaagtgatttctcttggtgacgttcagtctaac
tacctgttgacaacagcagagaatgagctgggagtcgtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgtgagatgcagtgcccgcggactcacaccaaagag
ttccgcaaagttgcgcgagtgcagccggagtatctacaggcatga

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