Seriola lalandi dorsalis (Yellowtail amberjack): 111659038
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Entry
111659038 CDS
T06058
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111659038 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111659038 (exosc1)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111659038 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111659038 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
111659038
NCBI-ProteinID:
XP_023267621
Ensembl:
ENSSLDG00000025181
UniProt:
A0A3B4YSX1
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCSIDDCIPGTGVYLRHGYIYSSLAGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHTKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaaactatgcagcatagacgactgtatt
ccaggcacaggagtatatctgcggcacggctacatatactcctcactagcaggctacgtg
ctcaagaaaaacgagggcgaggagttacctgtgatctcagtggtgagggaaacagaaaca
caactactgccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaaccccagg
ttcgccaaggtccacatcctttatgtaggctccacgccgctgaaggaccgcttcagaggg
actatcagaaaagaagatgtgcgggcaacagagaaagacaaggtggagacatacaaaagc
ttcagacctggtgacatcgtcttggcgaaagtgatttctcttggtgacgttcagtctaac
tacctgttgacaacagcagagaatgagctgggagtcgtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgtgagatgcagtgcccgcggactcacaccaaagag
ttccgcaaagttgcgcgagtgcagccggagtatctacaggcatga
DBGET
integrated database retrieval system