Seriola lalandi dorsalis (Yellowtail amberjack): 111659140
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Entry
111659140 CDS
T06058
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04137
Mitophagy - animal
slal04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111659140
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111659140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111659140
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
111659140
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111659140
Multi subunit type E3
ERAD complex
111659140
LMBR1L-GP78-UBAC2 complex
111659140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8
zf-C3HC4_4
zf_RING_Vps8_fungal
SHOC1_HhH_tandem
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
111659140
NCBI-ProteinID:
XP_023267744
Ensembl:
ENSSLDG00000004763
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTVLSVVLLAGSIFSAYTTVTDPGFGALETDETPAPSEADLEQL
NNDISNTELATTVLWYLVTDSLFVWVLVNTFCCSLMLIAKMIQYVVFGPLRVSEKQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPM
NSHVRVLCLLVSLLLDCCGLAVVCGLLGASHGMHTLSFMAAECLLVTVRTGHVITRYSIH
LWDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRVRRHKNYLRVINNMEARFAVATAEELATNDDDCAICWDTMLTARKLPCGHLF
HNSCLRSWLEQDTSCPTCRTSLNINGDGGQARGQQQGGGLEDNIGPVGAAPDARPHINQH
NHFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVMQ
DLQLTRSVEVTTDNILEGRIQVPFPTQAIERAPIQVGPAPDEQAGPSGAAEQGLSEPDNM
EVRGGRFSKSAEERQKMLKQRKEEMLQHARRRYLNKSPEDQDEDLPGLEEDTVPELDSTV
LRRRTVAAAAERRMQNQQDPSP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctgtttttggagaggtttccatggcccagcctgcagacctacacagtactg
agtgtggttttacttgctggcagcatcttcagtgcctacaccactgtgactgatccaggc
tttggggccctggaaactgatgaaacaccagccccctctgaagcggaccttgaacagtta
aacaatgatattagtaatacagaattggcaaccactgtcttgtggtatcttgtcactgac
agtctctttgtatgggtgttggtcaacacattctgctgctctttgatgttaattgcgaaa
atgattcagtatgtggtgttcggaccacttagagtgagtgagaagcagcatctcaaagat
aaattctggaacttcatcttctacaagtttattttcatctttggcgtactgaacgtacag
acagtggaggaagtggtcatgtggtgtttgtggttctctgccctggtttttctccacctc
atggttcagctctgcaaagatcgatttgaatatctgtcattctccccctccactcccatg
aacagccatgtgcgagtgctttgtctgctggtctccctgctgttggactgctgtggcctg
gctgtggtctgtggtctgctgggagcgtcccatggcatgcacacgctctcctttatggca
gcagagtgtctgctggtgactgtacgcactgggcatgtcatcacgcggtactccattcat
ctgtgggatctaaaccatccaggcacttgggagagtaagggaacatatgtctactacaca
gacttcatcatggagctagcgatgttgtttctggacctcatgcaccatatccatatgctg
ctttttggtaacatctggctgtccatggcaagcttggttatcttcatgcagctgcggtat
ctcttccatgaggtccagcgccgcgttcgccgacacaagaactatcttcgtgtcatcaac
aacatggaagccaggtttgctgttgctactgcggaagagctggcaactaatgatgatgat
tgtgccatatgctgggataccatgttgacagcacgcaaactaccctgtggccatctcttc
cacaactcttgtttgcgttcatggcttgagcaggacacctcgtgtccaacgtgtcggaca
tccctcaacattaatggggatggtggccaggcgagaggccagcagcagggcggaggtttg
gaagacaacattggcccagtaggagccgctccagatgccagacctcatattaaccaacac
aaccacttcttccactttgatggatctcgcattgccagctggctgcccagtttctcagtg
gaagtaatgcacactaccaatatcttgggtattgctcaggccaacaactcccagctcatg
gcaatggcccatcagatccaagagatgttccctcaggtgccctcttacctggtaatgcag
gacctgcagttgacccgctctgtggaggtcaccactgacaacatcctggagggacgcatc
caggtgcctttcccaacacaggccatagagcgtgcacctatacaggtgggccctgcacca
gatgagcaggcagggcccagtggagcagctgagcagggcctcagcgagccagacaacatg
gaggtcagaggaggtcgcttctctaagtcggctgaagagaggcagaagatgctgaagcag
aggaaagaggagatgctccagcatgcacgcaggagatacttgaacaaaagtccagaggac
caggatgaggatttgcctggacttgaggaggacactgtcccagagttggactcaactgtg
ctgagacgtagaaccgtggcagcagctgcagagagacgcatgcaaaaccaacaagaccct
tcaccctga
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integrated database retrieval system
