Seriola lalandi dorsalis (Yellowtail amberjack): 111659376
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Entry
111659376 CDS
T06058
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111659376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111659376
03036 Chromosome and associated proteins [BR:
slal03036
]
111659376
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111659376
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111659376
PBAF complex
111659376
GBAF(ncBAF) complex
111659376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
SpeFL
DUF919
Motif
Other DBs
NCBI-GeneID:
111659376
NCBI-ProteinID:
XP_023268089
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MATMSGGANLGIPGTSQTSSGVAVHRKKESSPSARFWESPDTLAQLEVVRQWIGKHYKKF
VLVDAPSCQALAAVTLQLLQFQEDAFGRQATSPSLTKLPAQCFLDLRPGGGLCHILGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFGTIEGALIQNNCMSLPVVYLEPTLDQELASRLTN
IITKHQGTLTEDRTLASHHVYPSPASTEEDEWMCPVMRKDKHVLVHWGMHPDSYDSWLSS
SDVEGEVEEPPHPEKPWRVHAGWVLDTDVFNEWMNEEDYCVDERNVPIILRQRIHLRDDQ
DSKSTPSKKRRRSPSPPSSEGRKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEEVIL
PKNVNLKKDSENTPVKGGTMADLDEQEDDFPGREDEEGRGELPRLSEGEDNITEQTHHII
IPSYTSWFNYNSTHLIEKRALPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTS
CRRNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQ
HKPLQVAASQHMLYFPEKSREKPSDCQNFGLRTDIYAKKHPKTKGASAGREWTEQETLLL
LEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQS
ENPVMSTVAFLASVVDPRVASAAAKAALEEFSRVQEDSVDKVSETSNQPEKIESMDAEKM
ETNSTSHQVPGRADGLKVEPSGAKVEGEQVKRENAENILGEERDGRGDDDESIVRREGDA
DEGRRVMELELVEGSVTTAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIK
LRHFEELETIMDREKEALEQQRQQLLSERQTFHTEQLKQAEMKVRQQREQQGQPGYTLQH
SGQSMPNRMMPSGGNTQPMAPRHPGAPNGMYPSSQPDGIAPAQPGPPASTHS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatgtccggaggagcaaacctcgggattcccgggacgagccagaccagctcc
ggggtggctgtgcatcggaaaaaagagagcagcccgtccgccaggttctgggagagtccg
gatactttagcccaactggaggtggtgcgacagtggatcgggaagcactacaaaaagttt
gtgttagtggatgctccatcatgccaggccctggctgcagtcactttacagctgctccag
tttcaggaggatgcctttggccgacaagctaccagtccttctctcaccaaactgcctgct
cagtgcttcctggacttgcgaccagggggtggactatgccacattcttggcactgcctat
aagttcaaggcagagcaaggctggcgaagatttgacttgcagaatccatcaagaacagag
aggaatgttgagatgtttggtacaattgaaggggcactgatccagaacaattgtatgtca
ctgcctgtggtatatctggaacccactcttgatcaggagttggcaagcagactgaccaat
atcatcaccaagcaccagggtacactcactgaggaccgaacgcttgccagtcaccacgtc
tatccctcacctgcttctacagaggaagatgaatggatgtgtcctgtcatgcgaaaagac
aagcatgtattggtacattggggcatgcaccctgacagttatgacagctggctgtcctca
agtgatgttgaaggagaggttgaagagccaccacatccagagaaaccatggagggtccat
gctggttgggttctagacacagatgttttcaacgagtggatgaatgaggaagactattgt
gtggatgagaggaatgtaccaataatcctccgccagcgtattcacctccgagacgaccag
gactcaaagtccaccccatccaaaaagagaagacgatccccctctcctccttcctctgaa
ggcagaaagaaaggaaagaagggtagaaggcgtggacaacaggaggaagagccagaagag
gacctgaccaaagacatggaggaccctacgcctgttcctaacatggaggaggtcatatta
cccaagaatgtcaacctgaaaaaagacagtgagaatactcctgttaaaggaggcaccatg
gctgacctggatgaacaggaggatgattttccaggaagggaggatgaagagggaagagga
gagctgccacggttatcagagggagaggacaatatcacagaacaaacccatcacattata
ataccaagctacacatcttggttcaattacaacagcactcacttaatagagaaacgtgca
ctgcctgaattctttaatggcaagaacaagtccaaatctccagaaatttacctggcgtac
cgcaacttcatgatcgacacataccggctcaacccccaggaatacctcagttcaacgtcc
tgcagacgcaacctcaccggagacgtctgtgctgtcatgagggttcatgcgtttttggag
cagtggggtttgattaactaccaagtggatgctgagagcagacccctccccatgggaccc
ccacccacccctcatttcaacgtacttgccgacacgccgtccgggctggccccactacag
cacaaacccctgcaggtggccgcctcgcagcacatgttgtatttcccagaaaagagcaga
gagaagccttcagactgccagaacttcggtctgcgcaccgacatctatgccaagaaacac
ccgaagactaaaggagcaagtgcaggaagggaatggacagagcaagagacactcttgtta
ttagaggccttagaggtttacagagacgactggaacaaagtatctgagcacgtgggctcc
agaacgcaggacgagtgtatcctccacttcctccgtctgccgatagaagacccttatcta
gaagactcctcggcctctctgggtccactggcgtaccagcctgtgcctttcagccaatca
gagaatcccgtaatgagcactgtggccttcctggcatccgtggtggatccacgggttgca
tcagctgcagctaaggcggcactggaggagttttccagagtgcaggaggactcagtggac
aaggtttctgaaacgtccaatcagcccgaaaaaatagaatcgatggatgcagaaaaaatg
gagacaaactccacctcccatcaggtccctggaagggcggatgggctcaaggtggaacct
agtggggcaaaagtggagggagaacaagtcaaaagggaaaatgcggaaaatattcttgga
gaggagagagatggaaggggagatgatgacgagagcatagtgcggcgagagggagatgcg
gacgaggggaggagagtgatggagctggagttggtggagggcagcgttaccacggcagca
gcagctgctctggcctcagctgccacaaaggccaagcacttggctgcagtagaagagagg
aagatcaaatccctggtggctctgctggtggagactcagatgaagaagctggagatcaaa
ctgagacactttgaggagctggagaccatcatggaccgcgagaaagaggctctggagcag
cagcggcagcagcttctatcagagagacagacttttcacaccgagcagctgaaacaggca
gagatgaaggtccgccagcagagggagcagcaggggcagccgggatacacattgcagcat
tctggtcagtccatgcccaaccgtatgatgcccagtggaggcaatacccagccgatggcc
ccgcgacaccctggagctccgaacggcatgtacccgtcctcacagcctgatgggatcgca
ccagctcagcccggtcctccagcgtctacccacagctga
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