Seriola lalandi dorsalis (Yellowtail amberjack): 111659463
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Entry
111659463 CDS
T06058
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111659463 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slal03021
]
111659463 (taf5l)
03036 Chromosome and associated proteins [BR:
slal03036
]
111659463 (taf5l)
Transcription machinery [BR:
slal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111659463 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
111659463 (taf5l)
Chromosome and associated proteins [BR:
slal03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111659463 (taf5l)
STAGA complex
111659463 (taf5l)
TFTC complex
111659463 (taf5l)
SAGA complex
111659463 (taf5l)
SLIK complex
111659463 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
PROPPIN
Nbas_N
WD_LRWD1
Beta-prop_IP5PC_F
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
111659463
NCBI-ProteinID:
XP_023268199
Ensembl:
ENSSLDG00000016733
UniProt:
A0A3B4XWZ3
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQADPQQYEAQYSRLRSFLSETEISWAKEVSSVLYPLFIYLHLDMVRCGLKGAVDGFYS
RFHSAFLQDSEQRAIIEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRALSTHLQVEVTASRRTDYQLYGTASGATATPNSTSTWAGVDGAEGGEGVEVP
AGIPQSEAALDALQDCIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKARPHQADVSRIHLACDVLEEEVDEEDGSGSEVKTLRGHSGPVFRTS
FLTDSSGLLSCSEDTTIRYWDLGSFTNTVLYQGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYSLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHGGMPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgcaccgagcagatccagtatgccgtggctcagtacctgaagaggagg
cagtatgtggacaccgacggctccctgaaaggagccaaactgttccagtcggccgaggag
atggctgccagcctcacagtgcagacagagtcgggttgtgccaacatcgtctctgctgct
ccctgccaggcggacccgcagcagtatgaggctcagtactccaggctgcgctcctttctc
tcagaaacagaaatatcctgggcgaaggaggtgagcagcgtcctctacccgctcttcatc
tacctccacctggacatggtgcgatgtggcctgaagggggcagtagacggtttctacagt
cgtttccacagtgcctttcttcaggacagcgagcagcgtgccatcatagagcagctccgc
catgttctcaccgctcaggacgttgcagccaatcccaagctgagtgctttcctggagcac
aagtatgtggttcacctgacggagccggcctacagctacctgctgcgttacctgcagagc
gaggacaacagcgccctctgcagggccctcagcacacacctgcaggtggaggtcaccgcc
tccaggcgtacggactaccagctgtacggaactgccagtggggcgaccgccaccccgaac
tccacctcgacctgggcgggagtggacggggcggagggcggggagggggtggaggtcccc
gcagggatcccgcagagcgaggcggccctggacgctctgcaggactgcatcaagaaagtc
cgcgagggccccccctcgctcaccaccgtgtgcttttacgccttccaccacacggagcag
atgctcaacaccgccgaggtctcggccgacagccggctgctggccgccggcttcgacagc
tccacggtgaagctgtggagcctccgagccagaaagctgaaggcccggccgcatcaggcc
gacgtgtcgcgcatccacctggcctgcgacgtgctggaggaggaggtggacgaggaggac
ggctcgggcagcgaggtaaagacgctgcgaggtcacagcggcccggtgtttcgcacgtcc
ttcctgacggacagctccgggctgctctcctgctccgaggacacgaccatacgttactgg
gacctgggcagcttcaccaacacggtgctgtaccagggccacgcctacccggtgtgggac
gtggacgtcagcccctgcagcctttacttcgccagcggctcccacgaccgcaccgcccgc
ctctggacgttctcccgcacctactcgctgcggctctacgccggccatctcgccgacgtc
gactgcgtcaagttccaccccaactccaactacctggccaccggctccacggacaaaacc
gtccggctgtggagcacccagcagggggcgtctgttcgcctcttcactggccaccgcggc
ccggtgctgtcgctcgccttctcacctaacggaaagtacctggcgtctgccggcgaggac
cagcgggtgaagctgtgggacttggcgtcggggacgttgttcaaagacttgcggggacac
acggacagcgtcaccagcttgtctttcagcccggacagcagcctagtggcgtcgtcgtct
atggacaactcagtccgggtgtgggacatccgtaactcccacggcgggatgccggctgac
ggctcgtccagcgagttggtgggactttacactggaaacaccagcaacgtgctgaacgtc
cagttcatggcctgcaacctgctgctggtgacgggaactgcacaagagaaagcagagcag
tag
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integrated database retrieval system
