Seriola lalandi dorsalis (Yellowtail amberjack): 111659645
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Entry
111659645 CDS
T06058
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase isoform X1
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111659645 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111659645 (dcp2)
Enzymes [BR:
slal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
111659645 (dcp2)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111659645 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
111659645 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
111659645
NCBI-ProteinID:
XP_023268433
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MFSTNMETKRVEIPSGVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTP
GAPHCGIRDFAKAVFHHCPFLLPHGEDVQKVLEQWKEYKMGVPTYGAIILDESLENVLLV
QGYLAKSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKNRISKDKYIEQKITDQLVRLY
IIPGVSKDTKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPL
RDWISRQRGESTDSDEDFNNINTPSKPSDNARSKSRRLTSTDVFPGNGWTKQMQQKAVGQ
LSQYELNQNPTIKANGKRCQDSPYVKKGANDTGASNQQVSLPLFPQKEDKRLQPRRLQDS
FDRDGAPISSNGQQTVHRDCEQLLSSKTFLNFRFDRDAIMKCFDY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaccaacatggaaacaaaaagagtagagattccctccggagtcctggacgac
ctctgcagccggttcatcctgcacatccccagtgaggagagggacaacgccatccgggtg
tgcttccagatcgagctggcccactggttctacctggacttctgcatgcagaacactcca
ggagctcctcactgtgggatcagagacttcgccaaagctgttttccatcactgtccattt
ctgttgcctcatggagaggatgtgcagaaggtactggagcagtggaaggagtacaagatg
ggtgtaccaacgtatggagcaatcattctggatgaatccttagaaaatgtgctgctggtc
cagggatacctggcgaagtcaggctgggggtttccaaaggggaaggttaatgaggacgag
gctcctcatgactgtgcagtgcgtgaagtattggaggagacgggctttgacatcaagaat
cgtatcagcaaagacaagtacatagagcagaaaatcactgaccagctggtgcggctctac
attattccaggagtgtcaaaggacaccaagttcaaccccaaaaccaggaaagagatcagg
aacatcgaatggtttcctattgagaagctcccgtgtcacaggaacgacatgaccccgaag
tctaaactcggactggcccccaacaggtttttcatggccatcccattcataagaccactg
agagactggatcagcaggcagagaggagagtcaacagacagtgacgaggacttcaacaac
atcaacactccatccaaaccttcagacaacgctcggtcaaagtcccgccgcctcacaagt
acagatgtgtttcctgggaacggatggacaaagcagatgcagcagaaggctgtgggccag
ctgagccagtacgagctgaaccagaacccgaccataaaggccaatgggaaaagatgtcag
gactcgccttatgtgaagaaaggagccaatgacactggagccagcaaccagcaggtctct
cttccactgtttccacagaaagaagataaaaggcttcaacccaggagactgcaggacagt
tttgacagagacggagctccaatcagctctaacggtcagcagacggtccacagagactgt
gagcagctgctctcctccaagacgttcctcaacttcagattcgacagagatgccatcatg
aaatgttttgactactga
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