Seriola lalandi dorsalis (Yellowtail amberjack): 111660071
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Entry
111660071 CDS
T06058
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04080
Neuroactive ligand-receptor interaction
slal04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111660071
04081 Hormone signaling
111660071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slal03000
]
111660071
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
slal03310
]
111660071
Transcription factors [BR:
slal03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111660071
Nuclear receptors [BR:
slal03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
111660071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111660071
NCBI-ProteinID:
XP_023268962
Ensembl:
ENSSLDG00000020776
UniProt:
A0A3B4Y7E0
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MMNYCIPDMYEMPHVGVGGYAMQGGGGEHCMYPGEGPGYGHCEPQPLHHHPPCVEQAWLP
GQHYSCSYAGGGPPVYKSEFCSMEIPLSHCHHQPEYFPEIKPDFSHLQWMQGAHRKGYIP
SYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLNPTYACKYEGKCVIDKVTR
NQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEENRERRRREELQRTVWDRLEPTQEE
WDLIRMVTEAHMATNAQGNHWKQKRKFLVEEAMLLNEITCNLFYTSDQSAAGVKETKPED
IGQASMANAPEGSKVDIEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCC
MEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGVSLSSFNLDDSE
VALLQAVILLSSDRPGLSSVERIERCQEEFLLAFEHYINYRKHKVAHFWPKLLMKVTDLR
MIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactactgcataccagacatgtatgagatgcctcacgtcggagtgggaggctac
gccatgcagggcggcggcggggagcactgcatgtacccgggtgaggggcccgggtacggc
cactgtgagccccagccgctgcaccaccacccgccctgcgtggagcaggcgtggctgccc
ggccagcactactcgtgctcgtacgccggcgggggccctcctgtttataagagcgagttc
tgcagcatggagatcccgctcagtcactgccaccatcagcccgagtatttccccgagatc
aaacccgacttctcacacctgcagtggatgcagggggcgcacaggaaagggtacataccg
agttacctagacaaggatgagctctgcgttgtgtgtggggacaaagccaccggctatcac
tatcgctgcatcacctgtgagggttgcaagggtttcttcaggcggacgatccagaagaat
ctaaacccgacctacgcctgcaagtacgaggggaagtgtgtcatcgacaaagtgaccagg
aaccagtgtcaggaatgtcgcttcaagaagtgcattgcggtgggaatggcgaccgacttg
gtgctggacgacagcaagaggctggccaagcggaagctaatcgaggagaaccgggagcgc
cgtcggagggaggaactgcagaggacggtgtgggaccgactggagcccacccaggaggag
tgggacctcatccgtatggtgactgaggcccatatggccaccaatgcccagggcaaccac
tggaagcagaaacggaaattcctggtcgaggaagctatgcttcttaatgaaataacatgt
aatttattctatacttctgaccagagtgcagcgggggtgaaggaaactaagcctgaggat
attggtcaagcgtccatggccaatgcaccggaaggaagcaaagtggatatagaagccttc
agtcagtttacaaaaattatcacccctgccataacccgagtggtggactttgccaaaaaa
ctgcctatgttttgtgagttgccttgtgaagaccagatcatcctgttgaaaggctgctgc
atggagatcatgtcgctgcgcgctgccgttcgctacgatccggagagcgagactctcacg
ctgaacggcgaaatggcggtcacacggggtcagcttaagaacggaggcctgggcgtcgtc
tcggacgccatcttcgacctcggcgtgtcgctgtcctcctttaacttggatgactccgag
gtagctctactacaggccgtcatcctgctgtcatccgatcggcctggcctgagcagcgtg
gagcgaatcgagcgctgccaagaggagttcctgctggcctttgaacattacatcaactac
cgcaaacacaaagtggcacatttctggcccaagctgctaatgaaggtgacggacttgcgg
atgatcggcgcctgccacgccagccgattccttcacatgaaagtggagtgtcccaccgag
ctattccctcctctcttcctggaggtcttcgaggactga
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