Seriola lalandi dorsalis (Yellowtail amberjack): 111660154
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Entry
111660154 CDS
T06058
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111660154 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
slal04121
]
111660154 (sh3rf1)
Enzymes [BR:
slal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111660154 (sh3rf1)
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111660154 (sh3rf1)
Ubiquitin system [BR:
slal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111660154 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-Nse
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
111660154
NCBI-ProteinID:
XP_023269073
Ensembl:
ENSSLDG00000021808
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRAGPGAGVCTNGTPGAVARAHGSGTRDQGTPGAQPQRAQ
AKSTLVRGIPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSSGDSGEGASSGPQSNGAQRAGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSIPVDALPPPPPPPPQSSAGGAAYSLAAGQRPSP
SISDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSTQPKVPMSLCTQAGRGVTIVSPSSAPLGAIVPGPDFNKPLTVCST
AVAANSQPVAVVTAAQTATGQQPKVPLHVSSQMTVNQARNAARTAACHSQDRPTAAVTPI
QSATPVAYLPHLAVCPQPSSSPAQGCTRAGVAMGCAAASLTPPNVSAASLEGDALRPVPV
LTVPVGPGNSSALNPVSNNAALSCRLDKDVKREKKSLLKLLSSNKKKSRPSPPSSPTLEA
EQTAAGEALHGAVGHDSSPPSGSVGCLESEPAAAAAAVASASSSSSSSSVPESSHRKSSP
LDGCAPIAPPPRQPCSSLLSQQHDARPIICERYRVVVSYPPQSEAELELKEGDIVFVHRK
REDGWFKGTLQRNGRTGLFPGSFVDSI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcagtattgttggatttgcttgagtgccctgtttgtctggagcggctggat
gcctcggcaaaggttcttccctgtcagcacaccttctgccgacgatgcctccagggcatc
ctaggctctcgcggcgagctgcgttgcccagagtgccggacattggtggagtgtgccgtg
gatgaacttcccagcaacatcctccttgtgcgcctgttggacggcatcaagcagaggcct
cggagggctggtcctggggctggagtctgcacaaacggtacgcctggagccgtggccaga
gcacatggcagtggaaccagggaccagggcaccccaggagcacaaccccagcgagctcag
gctaagagcacccttgtccggggtataccccagctcccctgtgccaaggcgctctacaac
tacgatggcaaggaaccgggagaccttaagttcagcaagggcgacatcatcattctgcgc
cggcaagtggacgagaactggtaccacggggagatgggtggagtccacggcttcttcccc
accaactttgtccaggtcatcaagccgctgccacaaccgccacctcagtgcaaggcgctc
tatgactttgagctgaaagacaaggaggcggacaaggactgtctgcccttctccaaggac
gatatcctgactgtgatccgcagagtggatgaaaattgggcagagggaatgctgggagac
aaaattggaatttttcccatctcatacgtcgagttcaactccgcagctcgtcagcttata
gagttagacaagccgtcggactccagcggagactctggtgagggggcctcctccgggccc
cagagcaacggcgcccagcgggcaggggagaagaagaacagcaagaagcgacattccttc
acctctctcaccatgtcccacaaacccatgctagctcctccccctcagcgtcactccatg
gaaataagcgggccggtcctcatcagctccagcaaccccacagcagccgcccggatcgga
gagatcagtggggggctttcctgcagcgcaccttcacaggtacatatttgcacaactgga
ttaatcgtcaccccgccccctagtagtccggttactacagcaactgtcttcacgtttccc
tcagagacgagctacacatccatccctgtggatgctctcccgccacccccacctcctccc
ccacaatcctctgccggcggagcagcgtattcattggctgccggacagagaccctccccc
agcataagtgaccaaagtgggagacaaagacccacagtctatgtggcgatgttcccttac
actccccggaaggaggacgagctggagctgaggaagggagagatgttcctggtgctggag
cgctgtcaggacggctggttcaagggcacctccatgcacactggcaagattggagtcttc
ccagggaactacatgagtccagtcagcaggacggcgtcgggcagcactcagcccaaagtt
cccatgagtctgtgcactcaggccggcagaggggtcaccatcgtcagcccctcctctgct
cctctcggggccattgttccagggcccgacttcaacaaacccctgactgtgtgctccacg
gctgtagctgccaactcccaacctgtcgctgttgtaacagcggctcagacggccacgggc
cagcagccaaaagtcccgctgcacgtcagctcccagatgactgtgaatcaggctcgcaac
gcggccaggacagctgcatgtcacagtcaggaccggcccacagcagcagtgacgcccatc
cagtccgcgacacctgtagcctaccttccgcacctcgccgtgtgcccgcagccctcctcc
agcccggcccaaggttgtacccgggccggggtggcaatgggctgcgccgctgcttctctg
accccacccaatgtcagtgccgcctccttggagggagatgctttgagacctgtgcctgtc
ctcaccgtgcccgtcggccccgggaacagctccgctcttaatcccgtgtcgaacaacgcg
gctctttcctgcagactggacaaggacgtcaagagagaaaagaaaagcctcctgaagctg
ttgtcctccaataagaagaagtctcgtccctcacccccctcctctccgacccttgaggcg
gaacagactgcagctggagaggcgctacacggcgccgtggggcacgactcctcccctccc
tccggctccgtcggctgcctggagtctgaacctgctgctgctgctgccgccgtcgcttct
gcctcttcatcctcctcatcctcttcggtcccagagtcttcccaccggaagagcagcccc
ctggacggatgtgctcctatcgctcctcctcctcgccagccgtgctcctctcttttatct
caacagcatgatgctcggcccatcatatgtgagaggtacagggtggtggtttcatatcct
ccccagagcgaggccgagctggaactgaaggagggcgacattgtgtttgttcacaggaag
agggaagacggctggttcaaaggcacgctgcagaggaacggcaggaccggactgttcccc
ggcagctttgtagacagcatctaa
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