Seriola lalandi dorsalis (Yellowtail amberjack): 111660334
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Entry
111660334 CDS
T06058
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111660334 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111660334 (thoc5)
03041 Spliceosome [BR:
slal03041
]
111660334 (thoc5)
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111660334 (thoc5)
Spliceosome [BR:
slal03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111660334 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
111660334
NCBI-ProteinID:
XP_023269342
Ensembl:
ENSSLDG00000001029
UniProt:
A0A3B4WI84
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSSEALKKRKSKVLRSEGGTPEMKRGRGEGDPQDVRVYSEEVELDGRDPEQDFLQYKESC
ESLATLMSEIQDLKANGAKDGCAEVEQKRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQGAPQEISRPHLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLSMPFEQTQKQTEIARHLPPPLYVLFVQANAYGQACDKNLTLSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLYFYYLMNLNIMTVKTKVSTTTDLSTAISAGDLLKSDTLLSCLYTSDQGRETPNPAN
RYQFDKVGIVSFADYVEELGHPYMWVQSLGGLHFPSDASEGVRVGSSLSASHMESTMKLL
RGRVQSRLALHKQFASLEHSIIPVSSECQHFFPAKIISRLARWTTISDQEYMDLQYTRHV
TEAGLAKETDLYFMAVVERGTARLQAAVVMSPRYPEISPLFSLSLSWKGERSGRTDDNLR
AMESEVNVFKNELQGPRPGHQLLTNQISRLCVCLDVYLETEGQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgaagctctgaagaagcgaaagtcgaaggttctccgcagtgaaggaggaacc
ccagagatgaagcgaggtcgcggagagggagacccgcaggatgtacgcgtgtacagtgag
gaggtggagctggatggcagggaccctgagcaggactttctgcagtacaaagagtcatgt
gagagtttggctactctcatgagtgagatccaggaccttaaagccaatggagccaaggac
gggtgtgccgaggtcgagcagaaacgtatgcagagctgcatccacttcatgaatctgaag
aaactcaatcgtctggctcatatgcgactaaagagaggcagagaccagacacacgaggca
aagcagaaagtggatgtgttgcaccttcagttgcagaacctgctgtatgaagtgatgcat
cttcagaaggagatcagcaagtgtctggagttcaagtctaagcatgaggaaatagacttg
gtgtctgaggaagagttttaccagggggccccacaggagatttccaggccccacctcaca
aaaaatgacccccaccaactcacactggctcgactggactgggagctagaacaaagaaag
aggttggcagagaaatacaaggagtcacaggccacaaaggagaagatccagaagagcatc
gaggtgaagaaggaacacctgagaagcttacagcctggactgaatgccatcatgcaggct
tctctcccggtgcaggagtacctgtccatgccttttgaacagactcagaaacagactgag
attgctcgccatctccctccacctctgtatgtcctgtttgttcaagccaatgcctacggc
caggcctgtgacaaaaacctgactctgtctatcagtggtgatgtggatgaagccaaggcc
ttgtccaaaccaccagaagattcccaggatgatgagagtgattcagatgcagaggaggag
caagagaaaacgaagaggagaaggccaactacaggcggccagctggatgacaagagacgg
gagatgctgaaaaggcaccctctgtctctctgcttagacctcaagtgtaaagatggcagc
atcctccatctctacttctactacctgatgaatctgaacataatgacagtcaagaccaag
gtctccaccaccacagacctaagcacagccatcagcgcaggggacctgctgaaatcagac
actctactcagctgtctctacaccagcgaccagggacgggaaacccccaatccagctaat
cgttaccagtttgataaagtcgggattgtttcctttgctgattatgtggaggagctgggc
catccctacatgtgggttcagagtctcggaggactacattttcccagcgatgcttcagag
ggtgtgcgtgtgggcagttctttgagtgccagccacatggagagcaccatgaagctgctg
aggggacgagtccagtcccgcttggctttgcacaagcagtttgcctctttagagcacagt
atcatcccggtctccagtgagtgtcagcacttctttcctgccaagatcatctcccgctta
gctcgctggacaaccatcagtgaccaggagtacatggatctgcaatatacacgtcatgtg
actgaggctgggctggcaaaggagactgatctgtacttcatggcagtggttgaaagagga
acagctcgtctccaggccgcagtggtgatgagcccccgttacccagagatctctcctctt
ttctccctctccctcagctggaaaggagagcgcagtggacgcaccgatgacaaccttcga
gccatggagagtgaggtcaatgtgttcaaaaatgaactacagggaccacgtccaggacac
cagctcctgaccaatcagatttcacgcttgtgtgtctgcctggatgtgtatttggagact
gaaggacaagatgacagcgtggagggaccacgagagttcccccgtgaaaagatgtgcttg
cgcactgtcaggggtccaaatcgtctgaagccattcaagtacaaccatcctcagggcttc
ttcagtcatcgctaa
DBGET
integrated database retrieval system
