Seriola lalandi dorsalis (Yellowtail amberjack): 111660373
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Entry
111660373 CDS
T06058
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03030
DNA replication
slal03410
Base excision repair
slal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111660373 (pole)
03410 Base excision repair
111660373 (pole)
03420 Nucleotide excision repair
111660373 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slal03032
]
111660373 (pole)
03400 DNA repair and recombination proteins [BR:
slal03400
]
111660373 (pole)
Enzymes [BR:
slal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111660373 (pole)
DNA replication proteins [BR:
slal03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
111660373 (pole)
DNA repair and recombination proteins [BR:
slal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
111660373 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
111660373
NCBI-ProteinID:
XP_023269400
Ensembl:
ENSSLDG00000025342
UniProt:
A0A3B4YTJ5
LinkDB
All DBs
Position
Unknown
AA seq
2295 aa
AA seq
DB search
MVLQNSGRYRADRGQSGGDQENQDDGSAMSALKRLERSQFTDEMDTRFGFDRMKEPGEKT
GWLMNMHPTEILDEDKRMISAVDFYFIQEDGNRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLLFNTVDDLVKVKREIAPAVRKNRER
EQSNDAYTSMLSSALSGGNVTSADEDGMSKSISDQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKIPLEQVTNFNEV
CNEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHNLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SSAQDSGDAAEAKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSHEKKPKVTISYPGAMLNI
MVKEGFTNDQYHELVDPASLTYTTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLDEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LQAGQAADIEDFGMPAKPLQPAILISTKRKRTSQGEDSQVESQDVELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRGGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRLFYVNQKVPKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNKYVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHRQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHNFEVRAEN
DVKAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLSAGMPVLSEFPVVPVHVADEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRSSVEINAQGCYSTVCVEMDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGATALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRL
GSTVVYGNFNRIILCTKKRRIDNAIGYVEYITNSIHSREIFHSLSLSFSRCWEFLLWMDP
ANYGGVKGKLPSSLLYGEEGTKKKKNRQGDGDEDGSEDEDEDEADVEEEDGDGETNEVEE
LIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQAS
QQAVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVTQPSEMFPVLPGSH
LPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCNSYILP
EVICHQCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESVEMALVEALQKKLMSY
TLQDLVCTKCKGVKEANMPLYCGCAGDFDLTFSAKRFSEQITVFRSIASHYNMSFLEETI
DWLLAMSPQISQSAH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagtggacggtacagagcggaccgagggcagagtggaggagatcag
gaaaaccaggacgatggatccgcgatgtcggctctcaagcggctggaacgcagccagttc
accgacgagatggacacccgcttcggcttcgacaggatgaaggagccgggggagaaaacg
ggctggctgatgaacatgcaccctacagagatcctggatgaagacaagaggatgatcagt
gctgtggacttttatttcattcaggaggatggaaataggtttaaggtggctctccccttc
aagccatatttttacatagccactaaaaagaactgtgagagagaagtcatctcatacctg
tctaagaagttccaaggaaaggtggcgaagcttgaaattctcccaaaagaggatctagac
ctgccaaaccatttagtcggactgaagagaagctacatcaagctgttgttcaacaccgtg
gacgaccttgtcaaagtaaagcgtgagatcgccccagcagtacgcaaaaacagagagagg
gagcagtccaatgatgcctacacttcaatgttatcaagcgccttatcgggtggcaacgtg
acctctgcagatgaagatgggatgtcaaagagtatttcagaccagttagacaacatagtg
gacatgagagagtatgacgtgccctatcatgtgcgagtgtcgatcgacctgaagatccat
gtggctcactggtacaatgttcgatacagaggcagcgcttacccaccagagatcgtacgg
agagatgatcttgtggagcgaccagaccctgttgttttggcttttgacattgagaccacc
aaacttccactgaaattcccagacgcagagacagaccagattatgatgatctcctacatg
atagacggacaggggtttctaatcacaaacagagagatcgtctcagagaacattgaggac
tttgagttcactcccaaacctgagtacgaggggcctttcactgtcttcaatgaggatgat
gaggcggccctcattcagaggtggtttgaccacgttcaagaaaccaagccaaacatcttt
gtgacgtacaatggagacttctttgattggccttttgttgagactcgggctgcccttcat
ggtctgagcatgcacagggagattggtttccagaaggatagccagggcgagtacaagtcc
agccaggccatccacatggactgtttaaggtgggtaaaaagagacagctacctgccagtg
ggaagtcataatctgaaggcagcagcgaaagctaaattgggctacgacccagtggagctg
gacccagaggagatgtgccgtatggcaacagaggagccacagactttagcaacctactct
gtgtcagatgctgtggccacgtattacctgtacatgaaatatgttcatcccttcatcttc
gctctgtgtaccatcatcccaatggagcctgatgaggtgctgcgtaaaggttcggggact
ctgtgtgaggccttgctcatggtgcaggccttccacgccaacatcgtcttccccaacaag
caggagcaggtcttcaacaaactgacagatgacggccacgtcatggactctgagacctat
gtgggcggccacgtggaggcgctggaatctggagtgtttcgcagtgacatcccctgccgt
ttcaaaatgaacccagctgcattcgacttcctgctgcaaagagtagagaggacgatgcgt
cacgccattgaggaagaggagaaaatccccttggagcaagtcacaaactttaatgaggtc
tgcaatgagataaagaagaagctgacttccctgaaggaggttccaaacaggatcgaatgc
cccctcatctaccatctggacgtcggggcgatgtaccccaacatcattcttaccaaccgc
ctgcagccatctgcaatggttgatgaagccacttgtgctgcctgtgactttaacaagcct
ggagccacctgccagaggagaatggcctggcaatggagaggggaaatcatgcccgccagt
cgcagtgagtttcaccgtatccagcaacaactcgagtctgagaagttcccaccgctgttc
ccaaacggaccgcctcgggccttccacaacctcaacagagaggagcaggccaaacatgag
aagaaacgtttggcagactactgtaagaaagcctataagaagacacacgtaaccaggctg
gaggaacgagtcaccaccatctgtcagagagaaaactccttctatgtcgacactgtgaga
gctttcagagatcggcgatacgaattcaaaggactccacaaggtgtggaagaagaagctg
tcctcagctcaggacagcggagacgccgctgaggcgaagcgctgcaagaacatggagatc
ctgtacgagtctcttcagctggctcacaagtgtattctcaactctttctatggctacgtc
atgaggaaaggggcgcgctggtactccatggagatggctggcattgtgtgctacactgga
gccaacatcatcactcaggccagagagcttatcgaacaaatagggaggcctcttgagttg
gacactgatggtatctggtgtgtcctccccaacacctttcctgagaactttgtggtgaag
acgagtcatgagaagaagcccaaggtgaccatctcctacccaggggccatgctgaacatc
atggtgaaggagggattcaccaacgaccagtaccacgagctcgtcgaccccgcgtccctc
acttacaccaccaggtcagagaacagcatcttcttcgaggtggacggcccgtatctggcg
atgatcctccctgcctctaaagaggaagggaagaagctgaagaaaaggtacgctgtgttt
aatgaagatggatctcttgctgagctgaagggttttgaagtgaagagaagaggagagctc
cagctcattaagattttccagtcatcagtgtttgaggctttcctcaaaggtaccactctg
gatgaggtctacgcctctgtggccaaagtggccgactactggctggacgttctatacagc
aaggctgccaacatgccagatgcggagctgtttgacctgatttcagagaatcggtcaatg
tccagaaagctggaggactacggagagcagaagtccacttctatcagcacagcgaagaga
cttgctgagtttctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccgaaaaccagagggttcacccgtcacagaaagagccattcccctggccatcttc
caggcagagcccagtgtcaagaagcatttccttcgtaagtggttgaagatgcccagcctg
catgacttggacatccgctctatacttgactggagttattacatagagaggttgggtagt
gccatccagaaaatcatcaccatccctgcagctctgcaacaggtgaagaacccagtaccc
agagtgaggcatcccgactggcttcacaagaaactcctggagaaaaatgacatttacaag
caaaagaaaattagtgagctgttcaccagtgagggaaagagacaggttgcccatcagcct
cttcaagcaggccaagccgcagacatagaggactttgggatgccagccaaacctctgcag
ccggccatcctcataagcaccaagcggaagcggacttctcagggagaggacagccaggtg
gagtctcaggatgtggagctcacacagtcctggagagagatcctgggaccgcccccacct
atgggaaagacacgggaggagcgtcttgtgtggctgcgctaccataagaaaaagtgggag
ctgcagctgaggcagaggaaggagagaaagaagaggaggaggctgctggatggtgaagct
cagcccgtaggtggaggagtgatcagaggtggccccaccaccggcctgggaagcttcctt
cgcagaacagcgcgtagcatcctggacatgccatggcaaattgtgcagattgcagagact
agtcaccccggtctgtacaagttgtgggctgtgattgggaatgacctccactgcatgaag
ctcaacatcccccgtctcttctacgtcaatcagaaagtgccaaaacaagaggagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctccaacattgtgtactacctttatgag
tactgtgtaccagaagacatgtaccaggagcacatcaatgagatcaacgcagacctctct
gcaccagacattgaaggagtctatgaaacacaggtccccttgctgtttcgtgctctggtg
cagcttggatgtgtgtgtatggtcaataaatatgttgtgagggatctggccggcagggag
gctgacactttcgacctggagcatttggagatgaggtctctggcccagttcagctacttg
gagcccgggagtgttcgccacatgtatttgtatcatcaccgccagggccacaaggctctg
tttggcctgttcatcccctctcagcgtaaagccagcatctttgtcctggacacagttcga
agcaaccagatgcccaacctgagtaacctttacacagctgaacgcactgccctcctagag
aagactacagaggagcttctgcctccagagaaacacaactttgaggtccgagctgaaaac
gacgtgaaggctatctaccgtgcactgcagcgcatactgctgaactacaaggaggagcgt
cgtgggcccaccctcatcgctgtgcagtcaaactgggagttgcgacgattgtcggcaggg
atgccggtgctttcggagttcccggtcgttccagtacatgtggctgatgagatcagctat
aacgtgctggattggcaacgccacggtgcccggcgcatgatccgccactacctcaacctg
gacagctgcctgtcgcaggcttttgacatggccaggtattaccacttacctgttgggaac
ttgcctcaggatgtgtccatctttggttcggacttgttcctggcaagacatctacggaaa
cacaaccacctgctgtggctttcacccacggccagacccgacctcggaggaaaagaagct
gatgacagccgcctggtcatggaaagtgatgacaggagctctgtggagataaacgctcaa
ggatgctattccacagtgtgtgtggagatggacctgcagagcctggcggtgaacaccatc
ctccagtcacagcatgtcaatgacatggagggcggagccagtctgggcgtcagttttgat
gtgatccagcaggcctcgttggaagacatgatgtcaggaaaccagggagcgaccgctctc
gctagctacgatgagacggctctctgctccaacaccttcaggatcttgaagagcatggtg
gttggatgggtcagggagatcactcagtaccacaatgtgtatgcagacaaccaggtgatg
cacttctaccgctggctgcgctccccgagctctctgctctatgaccccgcactgcaccgc
accctgcacaacatgatgaagaaggtgtttctacagttggttgcagagttcaaacgtctt
ggctcaactgtggtgtatggaaacttcaacaggatcatcctgtgtacgaaaaaacggagg
atagataatgccatcggctacgtagaatacatcaccaacagcatccactccagagaaatc
ttccactctttgtccttgtccttctcccgatgctgggagttcctgctgtggatggacccc
gccaactacggtggtgtgaagggcaaactgccctccagcctcttgtatggagaggaagga
accaaaaagaagaaaaacagacaaggtgacggcgatgaggacggcagcgaagatgaagat
gaggatgaggccgatgttgaggaagaggatggtgatggagagacgaatgaggtggaggag
ctgattgagagcaactggaacatcatgcagtatctaccccaaactgcctcctgtcagaaa
tacttcctcatgattgtctcagcctacattgcagcagtctaccacagcatgaaagaggag
ctgagacgtaacgctcctggagcaacaccagtcaagagacgtggaggcagccaggcttcc
cagcaggcagtgggggacttgagtgctcttcctggaatgatctccttctcccaggaatat
gtgtcaagtgagctgacacagaactttttcaccatcactcaaaaaatccagaagaaggtg
acgggcaccaggagtgtgacccagccctcagagatgttccccgtcctgcctggatcccac
ctgccactcaacaacccagcacttgagtttattaaatatgtttgccaggtcctttcactg
gatgccaacatagtgaaccaggtgaacaagctgaagagagacctcctgcgtcttgtggac
gttggagagttttcggaggacgcccagttccgtgacccctgtaactcctacatcctacca
gaagtcatctgccaccagtgcaatttctgtcgtgacctcgacctctgcaaggacccatct
gtggcacaggatgggtctgtcttgcctcagtggttctgctccaactgtcaggcccagtac
gagactgagtctgttgagatggctctggtagaagccctgcagaagaaactgatgagctac
acgctgcaggacctggtgtgtaccaaatgtaaaggggtcaaggaagcaaacatgcccctc
tactgtggatgtgcaggagactttgacctcactttctcagccaagcgcttctctgagcag
atcaccgtttttcggagcatagcgtcccactacaacatgagcttcctggaggagaccatt
gactggctgctggcaatgagcccacagatcagccagagcgctcactaa
DBGET
integrated database retrieval system
