Seriola lalandi dorsalis (Yellowtail amberjack): 111660396
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Entry
111660396 CDS
T06058
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013
Nucleocytoplasmic transport
slal03015
mRNA surveillance pathway
slal03040
Spliceosome
slal05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111660396
09122 Translation
03013 Nucleocytoplasmic transport
111660396
03015 mRNA surveillance pathway
111660396
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111660396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slal03019
]
111660396
03041 Spliceosome [BR:
slal03041
]
111660396
Messenger RNA biogenesis [BR:
slal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111660396
TREX complex
111660396
Spliceosome [BR:
slal03041
]
Complex C
Other components
EJC/TREX
111660396
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111660396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_3
RRM_occluded
KIND
Motif
Other DBs
NCBI-GeneID:
111660396
NCBI-ProteinID:
XP_023269430
Ensembl:
ENSSLDG00000005386
LinkDB
All DBs
Position
Unknown
AA seq
262 aa
AA seq
DB search
MSDKMSMSLDDIIKLNKKGGSGRGRGGGSSGSGGSSARAGGSSRPMRSRQNNFNRERNNR
STPYTRPRELPDKWQHDMFEEHVGGRRGQSAPAERIVESSGKLLISNLDFGVSDSDIKEL
FAEFGTLVKASVHYDRSGRSKGTADVHFETKADALKAMKHYNGVPLDGRPMKIQQVSSEV
DEQSRQSTQGSNGGFDRSRLGQPKFERRERGERGDRGERRQGGGGGGFRGRGRGGGNRPQ
LSAEELDAQLDAYNAKFQMDTS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataagatgagtatgtctctggacgacattattaagttgaacaagaaaggaggc
agcggccgcggccgcggcggaggatcatccgggtcgggtggaagttcagctcgtgccggt
ggatcgtcgaggccaatgcggagtcgacagaataatttcaaccgtgagagaaacaacaga
tccactccgtacaccaggcccagagagttaccagacaagtggcagcatgacatgtttgag
gagcatgttggtggacgcagaggacaaagtgcaccagctgaaagaattgtggaaagtagc
ggcaagctgctgatttccaatctggactttggcgtctctgattcagatataaaggagctg
tttgcagagtttggaacattggtgaaagcatctgtacactatgatcggtctggtcgcagt
aaaggaacggcagatgttcactttgaaactaaggcagatgcactaaaagccatgaagcac
tataatggtgtcccacttgatggccgcccaatgaagatccaacaagtatcatcagaggtc
gatgagcaaagcagacaatccacacaaggttcaaacggagggtttgaccggagcaggctt
ggtcaacctaagtttgaaaggagggaacggggagaacgcggagaccggggggaaaggagg
caaggtggcggcggtggaggtttcaggggtcgtggaagaggaggaggaaacagacctcaa
ctttctgcggaagagttggatgctcagttggatgcttacaatgccaagtttcagatggac
accagttag
DBGET
integrated database retrieval system