KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111660396
Entry
111660396         CDS       T06058                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03013  Nucleocytoplasmic transport
slal03015  mRNA surveillance pathway
slal03040  Spliceosome
slal05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111660396
  09122 Translation
   03013 Nucleocytoplasmic transport
    111660396
   03015 mRNA surveillance pathway
    111660396
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111660396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:slal03019]
    111660396
   03041 Spliceosome [BR:slal03041]
    111660396
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111660396
    TREX complex
     111660396
Spliceosome [BR:slal03041]
 Complex C
  Other components
   EJC/TREX
    111660396
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111660396
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_3 RRM_occluded KIND
Other DBs
NCBI-GeneID: 111660396
NCBI-ProteinID: XP_023269430
Ensembl: ENSSLDG00000005386
LinkDB
Position
Unknown
AA seq 262 aa
MSDKMSMSLDDIIKLNKKGGSGRGRGGGSSGSGGSSARAGGSSRPMRSRQNNFNRERNNR
STPYTRPRELPDKWQHDMFEEHVGGRRGQSAPAERIVESSGKLLISNLDFGVSDSDIKEL
FAEFGTLVKASVHYDRSGRSKGTADVHFETKADALKAMKHYNGVPLDGRPMKIQQVSSEV
DEQSRQSTQGSNGGFDRSRLGQPKFERRERGERGDRGERRQGGGGGGFRGRGRGGGNRPQ
LSAEELDAQLDAYNAKFQMDTS
NT seq 789 nt   +upstreamnt  +downstreamnt
atgtctgataagatgagtatgtctctggacgacattattaagttgaacaagaaaggaggc
agcggccgcggccgcggcggaggatcatccgggtcgggtggaagttcagctcgtgccggt
ggatcgtcgaggccaatgcggagtcgacagaataatttcaaccgtgagagaaacaacaga
tccactccgtacaccaggcccagagagttaccagacaagtggcagcatgacatgtttgag
gagcatgttggtggacgcagaggacaaagtgcaccagctgaaagaattgtggaaagtagc
ggcaagctgctgatttccaatctggactttggcgtctctgattcagatataaaggagctg
tttgcagagtttggaacattggtgaaagcatctgtacactatgatcggtctggtcgcagt
aaaggaacggcagatgttcactttgaaactaaggcagatgcactaaaagccatgaagcac
tataatggtgtcccacttgatggccgcccaatgaagatccaacaagtatcatcagaggtc
gatgagcaaagcagacaatccacacaaggttcaaacggagggtttgaccggagcaggctt
ggtcaacctaagtttgaaaggagggaacggggagaacgcggagaccggggggaaaggagg
caaggtggcggcggtggaggtttcaggggtcgtggaagaggaggaggaaacagacctcaa
ctttctgcggaagagttggatgctcagttggatgcttacaatgccaagtttcagatggac
accagttag

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